[Wed Aug 24 18:23:39 2016] >Input file: TM1KF6CGD.pdb >TM segments: C849-866_C886-903_C932-948_D970-989_D1008-1030_D1049-1068 MAIDEN score = -49.6046 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- I983D-I988D 1.19354912051174 L1030D-F1051D 0.84646790244133 L984D-L989D 0.806835491302479 N892C-I983D 0.757708323100059 W974D-A979D 0.751125802314221 W1027D-A1055D 0.750901776168033 V1023D-T1059D 0.701290641268149 L1030D-Y1052D 0.67758638042626 A899C-P980D 0.67663556309963 A852C-L1030D 0.66383754025695 F1019D-T1062D 0.660551782100989 L896C-I983D 0.654016493826473 V1050D-A1055D 0.649306674724118 W1049D-L1054D 0.64659976806915 P854C-A898C 0.645343513547342 V942C-A947C 0.621330501458476 G972D-P1025D 0.586492709023114 G971D-C1028D 0.578929841559603 L1020D-P1025D 0.578144288708456 V935C-I977D 0.566582340531813 R1015D-L1020D 0.560761824751556 A939C-I977D 0.551790897570799 T940C-V981D 0.54820049430533 L896C-P980D 0.539199812910491 L900C-P980D 0.536156696623257 F1008D-I1013D 0.535887896148299 N892C-I988D 0.532251615502043 V1023D-A1055D 0.523294493711282 F1019D-L1063D 0.517147785024636 A855C-L1026D 0.509097422985136 M973D-I978D 0.503120415319397 V856C-E861C 0.497045733280192 F1019D-L1024D 0.497015780845141 E861C-P1025D 0.49267817729044 A855C-P1025D 0.487091261893587 T851C-H902C 0.477760892948563 L862C-I1022D 0.47747917315646 A855C-T895C 0.473974794369908 S859C-V1023D 0.472910125242913 A899C-S975D 0.463752359673126 V856C-L1026D 0.46013619144677 E849C-P1025D 0.457437930560697 V856C-G1029D 0.453825972127937 G971D-V1023D 0.452748223420864 I888C-G987D 0.450462761017581 T851C-G1029D 0.445491631052386 W974D-L1024D 0.441326174375144 G972D-C1028D 0.436665378081429 N892C-G987D 0.435905567963971 S859C-M1021D 0.426633090619312 A1009D-V1066D 0.417867968442724 V1023D-L1058D 0.414959887498267 L900C-A976D 0.413208422792942 R1015D-V1067D 0.411107784849528 G971D-W1027D 0.409142818913966 V1016D-V1066D 0.408567085975828 P854C-I894C 0.403987667645705 S859C-I1022D 0.402141394953933 Q1010D-V1066D 0.39880018038746 F1017D-I1022D 0.393298445790576 T851C-A899C 0.390532581889191 F858C-I1022D 0.389905598962033 P854C-N892C 0.387873778136765 R1015D-L1063D 0.383619665657255 V856C-P1025D 0.377582985513025 A934C-A976D 0.376179022767853 L1054D-T1059D 0.372170746943501 E861C-T1062D 0.367268625157199 L1026D-A1055D 0.358941319579208 V856C-Y1052D 0.356837547280085 A970D-L1024D 0.35626229062431 I943C-M982D 0.356203279372795 M982D-G987D 0.351127714807926 A939C-I978D 0.347513560969694 L866C-G1065D 0.345415423464342 T936C-I978D 0.34150872358562 A899C-A976D 0.337754212184736 L1018D-V1023D 0.336002797418339 A855C-A976D 0.331904574856493 T1059D-T1068D 0.331482782669363 E849C-T903C 0.328842251643112 L1063D-T1068D 0.321295169985155 I860C-I1022D 0.315519332542473 A970D-G1029D 0.313675172777561 A939C-S975D 0.312068717670312 E861C-L866C 0.312014107460262 T903C-S975D 0.311932098724888 T895C-I983D 0.307187132571253 Y1052D-I1057D 0.304751229772189 L1018D-V1066D 0.304717499256578 F1019D-C1028D 0.301920269044603 I894C-A899C 0.298226572912001 L893C-A898C 0.298144033717545 H902C-A976D 0.294230976066192 T851C-P980D 0.293427571175308 V889C-I988D 0.291606140033984 L896C-A979D 0.290827284761524 L1030D-A1055D 0.290344747806052 N892C-A897C 0.289908238719539 A1009D-L1018D 0.288256881109181 S1011D-G1065D 0.28655050877509 F1008D-R1015D 0.285695724901723 W933C-V938C 0.285200910054788 T940C-W974D 0.284657010387018 S975D-G1029D 0.284287350017014 T936C-A976D 0.281830084262729 L900C-G972D 0.278489487226164 G850C-L900C 0.278121629556901 T895C-P1025D 0.275151004406933 T940C-I978D 0.274079446333685 P1025D-T1062D 0.272620946605448 S975D-P1025D 0.271318406477548 I943C-V981D 0.269178697514962 A855C-G1029D 0.268650117226542 L866C-G1014D 0.266296024645332 F858C-I863C 0.258611623124011 V981D-V986D 0.257245556412061 G972D-L1024D 0.255483949155197 A852C-L1026D 0.255279185213119 T903C-A976D 0.249953262201831 L901C-G972D 0.24790964037149 V856C-W1027D 0.245555087660287 P1025D-L1058D 0.24365440722804 C1028D-V1050D 0.241120099972227 V887C-N892C 0.236747431038406 A970D-W1027D 0.235058430025925 T940C-L985D 0.233848445632478 G850C-C1028D 0.230383409964881 M982D-V1016D 0.230248025610296 P886C-L989D 0.229414320596795 G971D-L1026D 0.22607039804716 T903C-I977D 0.225966028422478 W857C-G987D 0.22230683860788 P854C-H902C 0.219126884432962 I863C-T1062D 0.2143309079231 V856C-M982D 0.214295191335584 I890C-T895C 0.213229524406934 L900C-T936C 0.212578059267004 M1021D-V1060D 0.211599689288083 V946C-F1008D 0.209718014326559 G850C-T903C 0.209646933199304 V937C-M982D 0.208522144500654 V853C-L1026D 0.207443272439438 H902C-P980D 0.20647417539883 P854C-L1030D 0.206437368230963 I977D-C1028D 0.206072601094149 W857C-M982D 0.205907929046006 S859C-V1061D 0.201312684689965 V986D-M1021D 0.20059749252999 S859C-L1024D 0.200441000750303 T936C-I941C 0.199354795517705 L1054D-V1060D 0.197601294397101 S975D-P980D 0.197421534200941 F858C-G1029D 0.197175509111158 F1017D-G1065D 0.195248684343377 E849C-A897C 0.193437836585471 V853C-G1029D 0.193214181331505 L985D-M1021D 0.192614788726643 S859C-L1026D 0.192382155407826 I1057D-T1062D 0.191166441272962 V856C-V1023D 0.190888942052078 G850C-A898C 0.190188011002661 S859C-L1058D 0.189496736260177 F1012D-F1017D 0.189275980513665 W933C-I978D 0.18756118830205 A852C-G971D 0.186500432231032 A852C-A897C 0.186395554491204 Q1010D-F1019D 0.184951086539332 F1019D-V1067D 0.184554011265632 F858C-A898C 0.183284988955169 S1011D-V1016D 0.182699629034232 G865C-T1068D 0.182086079025046 T903C-T940C 0.181142344468968 H902C-T936C 0.180100786514313 W857C-I983D 0.178667693299351 L862C-G1014D 0.177968377906238 V856C-S975D 0.177419538208439 T940C-I977D 0.176199078716722 P886C-L893C 0.176146387394688 L866C-S1011D 0.17604044070915 A934C-I941C 0.175409769250398 G850C-W857C 0.175082187531489 S975D-L1018D 0.173261909139165 T1059D-I1064D 0.171955079453379 F858C-H902C 0.171433291911169 N892C-S975D 0.171068659034633 G865C-M982D 0.169882887060269 T895C-P980D 0.169708772208834 F945C-V981D 0.169391166659842 V856C-I1022D 0.168439194463898 V1016D-V1061D 0.168372205163318 A855C-I891C 0.167332197533261 I860C-I888C 0.167315920644448 I860C-I891C 0.166852329424096 P1025D-L1030D 0.16654181535227 P854C-L901C 0.165830722964005 V856C-L1024D 0.165584148171421 A970D-I977D 0.16554490870208 V1016D-V1060D 0.165112420189355 A979D-G987D 0.164760018597565 V853C-V1023D 0.164511601859572 G850C-A979D 0.163813624212275 L901C-W933C 0.162062725930868 A939C-G972D 0.161636831452177 A897C-G972D 0.161636831452177 G971D-I1022D 0.16135482454922 G1029D-L1058D 0.161087503991045 L932C-V937C 0.160521843961783 V889C-M982D 0.160074486434233 L1018D-P1025D 0.15952322911718 I891C-V986D 0.15883337060507 V942C-I977D 0.158259685541569 M1021D-V1061D 0.157946387342064 G1053D-L1058D 0.157357547743519 V853C-F858C 0.157258916673666 T903C-L932C 0.156446785395205 Q1010D-R1015D 0.155517489587865 W1049D-L1058D 0.154701900601553 A855C-V981D 0.154443272030179 T903C-A970D 0.154239141276465 C1028D-L1054D 0.1541997264713 I863C-M982D 0.15367424734103 G865C-G987D 0.152845103492552 G850C-L1026D 0.152829330216616 G972D-L1020D 0.151073071009941 A939C-I983D 0.150305843169334 A976D-I1022D 0.149945657206053 I888C-I894C 0.149924031975328 T851C-W1027D 0.149793002360843 A855C-I977D 0.149476148971917 P980D-P1025D 0.14827076270895 E861C-T895C 0.148229042970488 W857C-L1026D 0.146696189020358 T851C-P1025D 0.146299357544446 I888C-L893C 0.146273609522597 G865C-L985D 0.145512538980439 I943C-L948C 0.144470802985313 T851C-L900C 0.144046791254916 G971D-F1019D 0.143605951563688 V856C-M973D 0.143238749669756 W857C-I888C 0.142765969077637 A976D-M1021D 0.142468950700202 H902C-G971D 0.141477131116391 I860C-L1030D 0.141419815151076 M1021D-G1065D 0.141026999693963 V938C-A979D 0.140364460666959 A897C-A976D 0.140121941339746 A855C-M982D 0.139960182212832 F858C-F1017D 0.139556837752024 I863C-L1024D 0.139531539254275 S1011D-T1068D 0.138345269054083 T895C-I977D 0.137799493012256 V1023D-V1066D 0.137753031844413 L948C-I988D 0.137713844998846 S1011D-M1021D 0.137239276327699 L893C-G987D 0.136848977207098 S859C-V986D 0.136115433845778 E849C-L901C 0.136023709604566 W857C-L1054D 0.135788841353243 L1054D-L1063D 0.135733459321239 E849C-T895C 0.135275954463685 L984D-M1021D 0.134966721678287 I863C-V1060D 0.133580659287716 V937C-S975D 0.13357795346098 I941C-I977D 0.133233527035962 W1027D-L1054D 0.133108677512004 T895C-S975D 0.133039273086722 T851C-G971D 0.132604591065756 P1025D-L1054D 0.132191304755705 S859C-V1060D 0.131814908293474 S859C-G1029D 0.131757645948419 V889C-V981D 0.131599870802883 T903C-P980D 0.130213241357889 L1018D-V1061D 0.129909515863293 A898C-I983D 0.129890575257754 H902C-P1025D 0.129758446630768 L1020D-V1066D 0.129375721972648 L1020D-I1057D 0.128519902536658 L896C-V986D 0.12799691355338 G1014D-T1068D 0.127402567821566 F1019D-V1066D 0.126393883410258 I978D-L1026D 0.126294697991662 I860C-T895C 0.126222804386609 E861C-G1065D 0.126080083552731 V1016D-I1064D 0.125278487766355 E849C-G972D 0.125246891842076 A899C-P1025D 0.12523667660769 L862C-I888C 0.125076401519887 S859C-A976D 0.124891682016846 I943C-G1014D 0.12452431124853 S975D-L1024D 0.124151254047302 I1013D-G1065D 0.123996984868859 A976D-M982D 0.12272748297827 A855C-T903C 0.122614893100772 V853C-A979D 0.121934827642586 P854C-C1028D 0.121553341003389 L948C-M982D 0.121494065579208 T940C-P980D 0.120977448839247 I977D-I1022D 0.120570732385596 L862C-L984D 0.119714718411584 I1022D-T1059D 0.119143798918248 Y1052D-V1061D 0.119118749767464 I943C-I977D 0.118800252624596 I1013D-L1018D 0.118389979081913 L932C-W974D 0.118233893059414 W857C-A979D 0.118219514987291 I891C-L989D 0.117928818501425 L901C-L932C 0.116852883301221 S859C-N892C 0.116552703844173 I890C-I983D 0.116289236982824 W974D-F1017D 0.115499428022882 A947C-S1011D 0.115385206746818 A897C-L984D 0.114414591170666 I943C-I1013D 0.114320864369765 A852C-C1028D 0.114061816580902 V853C-G972D 0.11376922203509 V935C-S975D 0.113474631371318 S859C-A1055D 0.113470792628908 I978D-M1021D 0.113245500663826 V856C-V1050D 0.11222078147286 G1014D-T1062D 0.111787889610789 V887C-L893C 0.110900959466241 F1012D-G1065D 0.110626598416662 L1030D-A1056D 0.110527223988434 T851C-S859C 0.110424269768288 A899C-G987D 0.110010178835099 G865C-R1015D 0.109393819940319 A947C-L1018D 0.109057559126201 P886C-V986D 0.108749820663798 V935C-A979D 0.108682230169479 L1024D-A1056D 0.10824402179445 A855C-G987D 0.10786814702493 A852C-A979D 0.107028158686534 N892C-A979D 0.106719679532207 G971D-A1055D 0.106616107307494 G1029D-A1056D 0.106602493516489 A947C-G1014D 0.106138383130659 L932C-I977D 0.105686506898606 V856C-L1054D 0.105671950625201 P854C-E861C 0.105615122482175 M982D-P1025D 0.105438208489021 S859C-A1056D 0.105253640381562 L1018D-V1067D 0.105089234442696 T903C-V935C 0.104831120761697 E861C-N892C 0.104735506278384 T851C-F858C 0.104199061548874 A852C-A1055D 0.104074011693151 S859C-A899C 0.103658894921379 V889C-I894C 0.103637192104546 L866C-V1060D 0.103290691741424 V853C-L900C 0.103144817251322 F864C-G987D 0.102632479820702 W1027D-I1057D 0.102531839578018 G850C-G971D 0.102455165247548 A934C-V942C 0.101976984395694 G850C-G972D 0.101947647751017 A899C-A979D 0.101532053513698 A970D-V1016D 0.101345441655265 V856C-P980D 0.101061041945615 T936C-I977D 0.100710351118096 T940C-A976D 0.100538643074443 V938C-L944C 0.100397948693077 S859C-C1028D 0.0995866271557495 V856C-L862C 0.0993380621127145 G865C-T1062D 0.0986691857741085 L944C-P980D 0.0982186549242394 A897C-V986D 0.0980208498037167 G865C-G1014D 0.0979320193905486 A898C-L984D 0.0974426730877833 T903C-G971D 0.0972257361702966 V946C-L984D 0.097133524736005 L866C-V1016D 0.0969673804204114 H902C-W933C 0.0969024114813133 A979D-I988D 0.0968472943729868 P854C-L900C 0.0964636040854552 A1009D-L1020D 0.096372443756265 A855C-I863C 0.0959039535748705 G1029D-G1053D 0.0956135788509362 L948C-V981D 0.0955746371918091 W1027D-Y1052D 0.0953496121832567 R1015D-V1023D 0.0953101481478855 L1024D-L1063D 0.0952021745641409 V942C-L985D 0.0950350904551316 V853C-A976D 0.0950271721418652 L1024D-V1061D 0.0949638211643498 V986D-L1018D 0.0948069182978333 V853C-G971D 0.0944834169058741 V1050D-V1060D 0.0939908812817123 L862C-V1016D 0.093931840823541 E861C-I988D 0.0939024357182152 I891C-L901C 0.0938017842234385 L896C-L989D 0.0935749325208795 V856C-L1018D 0.0931996649379996 E861C-F1019D 0.0925582240997604 I863C-L985D 0.0920375985022234 V856C-A899C 0.0918729172378335 V935C-I941C 0.0918540114317619 M973D-V981D 0.0915165951494021 T936C-M982D 0.0911261804370399 G1014D-I1064D 0.0911092778624178 M982D-L1018D 0.0906557145997573 F864C-T1059D 0.0903512201874312 A852C-L1024D 0.0903446428321431 A899C-I983D 0.0901804777939583 W857C-A898C 0.0900961774500795 I860C-V1060D 0.0899759182396909 V981D-L1018D 0.0895665919685384 T851C-I891C 0.0895230335102151 P854C-G971D 0.0892830460583545 N892C-L984D 0.0891276738627891 S859C-P980D 0.0890971958533076 A897C-I977D 0.0887132190579578 L948C-V986D 0.088693866152985 I860C-L985D 0.0886522861058915 L985D-F1008D 0.0885054395559253 L866C-L1020D 0.0882950896513268 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