[Wed Aug 24 17:22:57 2016] >Input file: TM2MOFATD.pdb >TM segments: A375-408 MAIDEN score = -5.7221 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V388A-Y396A 0.196690909481519 Y396A-K401A 0.190029865371267 L393A-K401A 0.169638086969233 I390A-I398A 0.166639491376027 A384A-V392A 0.164750926650966 L376A-G382A 0.162928350365432 G387A-L394A 0.160123829210821 L391A-G399A 0.147293870448011 A380A-V388A 0.145896941829392 I398A-H403A 0.135971339903759 A384A-L393A 0.114059204475478 A383A-I390A 0.113953964002029 G387A-A395A 0.112957529350176 V377A-A384A 0.11154612309343 L385A-L393A 0.109519054681136 G387A-V392A 0.107234680631749 L385A-V392A 0.10593714271533 L400A-A405A 0.104878085206324 V377A-L385A 0.102523953472996 I379A-G387A 0.0995419435844637 A386A-L394A 0.0959417664231756 A380A-L389A 0.0952351070330177 L389A-I398A 0.0938017842234385 V381A-L389A 0.0922127116153191 H402A-Y407A 0.0835541426590263 A383A-L391A 0.0823044889908768 L391A-L400A 0.0804995276601357 V381A-I390A 0.0767091534109445 Y396A-H402A 0.0753205361557762 A380A-G387A 0.065507657657486 G382A-I390A 0.0564826089191595 H402A-E408A 0.0457510241039196 P378A-L385A 0.0448683242188554 V388A-A395A 0.0366448488487006 F375A-V381A 0.0306196177341915 A386A-A395A 0.0290508431094989 I398A-H404A 0.0240354325732035 P378A-A386A 0.0235902280091453 L385A-L394A 0.0186250418556861 L394A-H402A 0.0184674675249834 G399A-H404A 0.0169245861664125 G387A-Y396A 0.0157724754060933 G382A-L391A 0.0105324625635159 I379A-A386A 0.00998105433346419 V392A-L400A 0.00905569530953088 L393A-H402A 0.00797160750708148 L389A-F397A 0.00611171589916992 A384A-L391A -0.00399739363744267 L389A-Y396A -0.0104249148333562 V392A-G399A -0.0114423520009446 V377A-A383A -0.0191681016832872 A383A-V388A -0.0217387811510141 A383A-V392A -0.0219871743535691 G382A-L389A -0.0269581677609665 A395A-H402A -0.0272204692750169 V388A-L393A -0.0355680085799612 Y396A-H403A -0.0373028747571118 V392A-K401A -0.0665598931997424 V381A-A386A -0.0709912688369085 H403A-E408A -0.0721958182206088 L389A-L394A -0.0811814031443303 V377A-G382A -0.0855879396141499 L391A-I398A -0.0882527463624165 I390A-G399A -0.0922328384218956 K401A-G406A -0.10393884435638 F375A-A380A -0.105934040242644 G382A-V388A -0.120610280375292 A386A-L393A -0.122212412281455 G387A-L393A -0.122556844275047 I379A-A384A -0.128560128187175 K401A-Y407A -0.130026335543413 F375A-G382A -0.130189483391525 L391A-Y396A -0.138218488681005 F397A-H403A -0.138988848488478 V388A-F397A -0.145586435064016 L393A-I398A -0.148459994095759 P378A-A383A -0.150007154318287 V381A-G387A -0.159195676305441 L389A-A395A -0.161988127445845 A383A-L389A -0.165154308105091 V392A-I398A -0.167645473947158 I390A-Y396A -0.172693128389711 A380A-A386A -0.17277843606879 V388A-L394A -0.173406751020556 V381A-V388A -0.173619113617248 P378A-A384A -0.1762426595271 F397A-H402A -0.180390850700661 L394A-K401A -0.182047085307763 L393A-L400A -0.187691238105206 L385A-L391A -0.197170411501837 I390A-F397A -0.201751842013856 A395A-L400A -0.205969854928611 A395A-K401A -0.212362522476827 L394A-G399A -0.212777308589104 A384A-L389A -0.218070359368639 A386A-L391A -0.225128544061658 L385A-I390A -0.233934210732722 G382A-G387A -0.240925470195956 I390A-A395A -0.269988426565645 A380A-L385A -0.276053678680253 L376A-V381A -0.277717738656771 L391A-F397A -0.282986346536351 V392A-F397A -0.311493719412759 A384A-I390A -0.331800330971944 I379A-L385A -0.33635041722725 A386A-V392A -0.339353964540626 L393A-G399A -0.342678610031708 L394A-L400A -0.44234689907788