[Thu Aug 25 00:29:30 2016] >Input file: TM3J9CATG.pdb >TM segments: A500-509_A550-559_A569-592 MAIDEN score = -2.0578 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F552A-I591A 1.00913198798741 F554A-I589A 0.957170016905763 N553A-L590A 0.942245167780846 F552A-L590A 0.898850875412083 T558A-M587A 0.7739788743972 V508A-L583A 0.716861100948089 D551A-L590A 0.70730279329028 F554A-L590A 0.688217432409422 F552A-I589A 0.645424042885143 V508A-N584A 0.644084360157329 F554A-S559A 0.630060650180772 Q557A-M587A 0.601017553488076 T558A-I589A 0.587783066724716 L569A-K580A 0.519957339713973 D555A-L590A 0.425589069979726 A571A-V577A 0.404901774506214 Q556A-K586A 0.403605310887905 D555A-M587A 0.383019671507512 N570A-K580A 0.374347376121631 L500A-R592A 0.349429317652161 N509A-K582A 0.339507162289003 F550A-I591A 0.33884745730677 S559A-K582A 0.327501586845142 F552A-R592A 0.321750821790709 A571A-T576A 0.305965389364143 A507A-K582A 0.271296951878654 R503A-M587A 0.247114995736629 R504A-K586A 0.193196156947243 F554A-M587A 0.188385849536353 Q556A-N588A 0.180976320435545 F550A-N573A 0.180171267944552 A507A-T558A 0.177348233918625 I574A-I589A 0.164931565197553 A506A-N584A 0.15361669342562 T558A-L583A 0.151741318187005 R503A-K586A 0.147056002187265 N509A-N588A 0.146047933557176 N553A-N573A 0.145451975705758 A506A-A585A 0.141795630467481 D579A-N584A 0.141718805254094 A507A-N584A 0.1385472737603 I574A-L583A 0.137975994545332 I505A-I589A 0.136129555961569 S559A-N584A 0.136059713123357 F552A-T558A 0.135235939412853 N570A-D579A 0.134927840991106 T558A-I591A 0.133396844004321 N509A-L583A 0.132068516222445 I574A-K582A 0.129353504006328 V501A-I589A 0.126853345460045 E502A-N553A 0.125481475719863 N553A-R592A 0.124686622295247 S559A-A571A 0.124519503747564 T572A-K580A 0.124150661966686 T572A-L578A 0.123416147071062 D551A-Y575A 0.121378626128278 I505A-N584A 0.116884199174705 E502A-K586A 0.114812879351733 L583A-L590A 0.11211438506158 Q557A-N588A 0.11155379821139 A506A-N588A 0.111531674755215 T558A-K582A 0.107293157398362 V508A-A585A 0.101816333976275 R503A-A585A 0.1003032059923 A507A-K586A 0.0997346179824099 D555A-R592A 0.0976408507689026 I574A-K580A 0.0975516056913683 K582A-I589A 0.0954916033421989 E502A-L590A 0.0949018837903672 T576A-K582A 0.0947901810655694 D555A-I589A 0.0881460304188835 V577A-L583A 0.0871500751691179 F550A-R592A 0.0849194485186926 F554A-N584A 0.084315104230047 S559A-T572A 0.0840383914643944 Q557A-K586A 0.0839949003137254 I581A-I591A 0.0839811380347677 A507A-L583A 0.0833346530542785 A507A-N588A 0.0796638479936798 Q557A-N584A 0.0784285489854109 A507A-I589A 0.077908278267814 N570A-T576A 0.0774388032024484 L583A-I591A 0.0767606259009042 D551A-N573A 0.0735676418958549 L500A-F550A 0.0723118306107957 N570A-L578A 0.0688228298680884 R503A-L583A 0.0683453047690836 T558A-I574A 0.0659641029592919 I574A-I591A 0.0657317101582731 S559A-L583A 0.0646072749125099 E502A-R592A 0.0643080814784747 S559A-I591A 0.0595150212827742 S559A-K586A 0.0574857581798565 F552A-I581A 0.0557688625838187 I505A-K582A 0.0542836631349544 N570A-Y575A 0.0542252091216451 I505A-L590A 0.0536160142266628 I505A-T558A 0.0519911817446044 D551A-S559A 0.0514635555568754 L578A-L590A 0.0509939417129033 N553A-Y575A 0.0508578336055759 S559A-A585A 0.0455908203151578 D551A-L578A 0.0453537837865241 T572A-V577A 0.0431977362766105 F552A-V577A 0.0404841703329728 Q557A-A585A 0.0384766011535491 Q557A-L583A 0.0365046873712185 F552A-N573A 0.0357124669189326 L569A-V577A 0.0353751073320261 R504A-N584A 0.0337660372574646 D551A-N588A 0.0335769928763723 T572A-D579A 0.0325678287565947 F554A-A585A 0.0304001835612864 A507A-I581A 0.0302156188862761 F554A-R592A 0.0291674364550767 F554A-K586A 0.0287728273810459 N573A-I581A 0.0276725941594229 D551A-T572A 0.0273535945822223 R504A-L590A 0.0257127474559056 S559A-L590A 0.0254148288158014 T558A-K586A 0.0240193450274497 I574A-R592A 0.0217649738137546 L578A-I591A 0.0204157801694382 Y575A-I589A 0.01977051345657 N570A-I581A 0.0181811819853919 L500A-F552A 0.0160496718755025 F554A-L578A 0.0149660992506409 N553A-I574A 0.0138050328714405 V501A-N588A 0.0125047308761284 Q557A-I581A 0.0120218208170062 Y575A-K582A 0.0114762636037379 A506A-K586A 0.0107980489138426 N553A-I591A 0.00898239841665571 Q556A-I591A 0.00896933947675027 L500A-I591A 0.00825063619851152 T558A-L578A 0.0053261554608478 N584A-I589A 0.00464934683910023 R503A-R592A 0.00375807555118168 F552A-T576A 0.00357543707418984 N509A-T558A -0.00132733192436163 S559A-N573A -0.00155054351771677 L500A-L590A -0.0034117298308951 N553A-S559A -0.0110170674565477 T572A-I581A -0.0134550685553005 F554A-I574A -0.0137083523703394 S559A-I574A -0.015711270913948 A506A-I589A -0.0157248608767848 S559A-I581A -0.0170492527992203 A571A-D579A -0.0215090947448227 R503A-I591A -0.0223074495411313 V508A-N588A -0.0232022256624429 N509A-K586A -0.024836413665005 I581A-N588A -0.0277551968696252 L569A-L578A -0.0282453443199522 L569A-Y575A -0.0284252207659872 R503A-N584A -0.0297858309939267 R504A-T558A -0.0307333896351862 F554A-I581A -0.0338506417151305 V508A-T558A -0.0347859423335595 R504A-N509A -0.0348533582202254 S559A-L578A -0.0383916670239222 F552A-I574A -0.0402678216462982 L569A-D579A -0.0403197909631836 F550A-V577A -0.0406184127159142 Q557A-L590A -0.0467739231062692 I581A-M587A -0.0500600780460065 I581A-K586A -0.0527627477656161 I505A-I581A -0.0539860138704595 A571A-I581A -0.057705952529636 R504A-I591A -0.0577677043485938 Y575A-R592A -0.062210287507801 R504A-L583A -0.0627222447132976 Y575A-L590A -0.062898209196903 L583A-N588A -0.0654119024489273 F550A-T576A -0.0685634249071896 N553A-L583A -0.0702954917738623 R503A-F554A -0.071081977037587 D551A-T558A -0.0722969599049996 F552A-N588A -0.0734251502224058 D555A-A585A -0.0780804699273059 T558A-N584A -0.0781406280523704 F552A-S559A -0.0792801508881804 F550A-I574A -0.0797200500083735 L569A-L583A -0.0816098555647766 Q556A-A585A -0.0816461752859605 F550A-L578A -0.083654178048524 F554A-Y575A -0.0842307146390393 N553A-I589A -0.0852791890378839 L578A-I589A -0.0863617520938949 D555A-L583A -0.0872265661432991 F550A-I589A -0.0890065349457281 N584A-L590A -0.09130838554566 F552A-L578A -0.0918544543702937 F552A-Q557A -0.0928480986962983 S559A-M587A -0.0929890443539749 N553A-T558A -0.0951255516815462 Q556A-L583A -0.095614980347967 R504A-F554A -0.0964287831282853 I574A-L590A -0.0964773068356277 Y575A-I591A -0.0986493690317873 L578A-N584A -0.101398554834927 F554A-L583A -0.106075064748818 N573A-D579A -0.106826908244759 V501A-N553A -0.108625099774371 L500A-I589A -0.109348129143401 D551A-I589A -0.109409639879708 N509A-M587A -0.110238036321572 N570A-K582A -0.1103184226045 N553A-L578A -0.111260200886344 L500A-N588A -0.111711239364351 T558A-N588A -0.112938125881949 D555A-I591A -0.113830444872809 N573A-L578A -0.113843545777971 V508A-K582A -0.113892269541119 I505A-I591A -0.114379256242632 N573A-K580A -0.114746839243596 A507A-K580A -0.115810736437871 L569A-T576A -0.115840234727001 Q556A-N584A -0.115867828744049 N509A-Q557A -0.117550091357673 L500A-D551A -0.118160179255577 V501A-F550A -0.119485797132244 V501A-F552A -0.119880201101887 R503A-I589A -0.123261843452305 F552A-L583A -0.124303201883058 S559A-I589A -0.124750885709545 F552A-T572A -0.124774057189885 E502A-M587A -0.127064027859788 N509A-I581A -0.12859552538444 F552A-D579A -0.132403153709897 A571A-K582A -0.132877261924847 D551A-T576A -0.134092553080019 D555A-N584A -0.135378067229287 L500A-N553A -0.135626710639639 F552A-M587A -0.136589403326729 N553A-K586A -0.136652836175823 D551A-I574A -0.138049034454924 Q556A-L590A -0.138297857432711 K582A-M587A -0.146819333393441 A506A-I581A -0.150619697151543 Y575A-L583A -0.151448349419713 S559A-N588A -0.153635598555438 I574A-D579A -0.154559685537335 N553A-I581A -0.157665766438692 F550A-Y575A -0.159251259661741 N553A-N588A -0.16040184644044 T558A-I581A -0.160584686255984 L569A-I581A -0.160870606393196 V501A-R592A -0.162254151811238 V508A-K586A -0.162501818147939 I505A-K586A -0.164882126254289 R503A-N588A -0.16510439982452 E502A-I589A -0.167993733651985 R504A-K582A -0.169487200259136 A507A-D579A -0.16978373239881 R504A-I589A -0.16989916799607 F552A-Y575A -0.171048025007501 V501A-L590A -0.171957558749241 A571A-K580A -0.172982201622741 D555A-K586A -0.173749341667041 V508A-I581A -0.180387860252646 Q556A-I589A -0.181236121594721 Y575A-I581A -0.18340819508385 E502A-F554A -0.185448241586448 A506A-K582A -0.186260667889473 T558A-A585A -0.188261049601226 E502A-F552A -0.189519037454293 L578A-L583A -0.190024899522361 E502A-I591A -0.194541306663802 R503A-L590A -0.19927262406893 D551A-V577A -0.199589677459277 R504A-A585A -0.203615648807275 L569A-K582A -0.204727254017201 A506A-M587A -0.206665510098717 V508A-K580A -0.209603882881034 I505A-M587A -0.21559216605206 K582A-N588A -0.220711812484306 I581A-I589A -0.223101429756919 N553A-M587A -0.22504736766606 R504A-M587A -0.227761881393526 A506A-L583A -0.229400819861539 Y575A-K580A -0.23023460299552 V577A-K582A -0.233311911514087 F554A-I591A -0.23430820213916 Q557A-I589A -0.237101463179923 Q557A-K582A -0.240892493126676 V508A-M587A -0.24102155064878 A571A-L578A -0.247502166741492 E502A-D555A -0.24884031513767 T576A-I581A -0.255063643353746 F550A-L590A -0.264623801745191 F554A-N588A -0.267893812599174 R504A-N588A -0.278041659868993 I574A-I581A -0.279286773186609 A507A-A585A -0.280489958768892 T558A-L590A -0.285256503295282 E502A-N588A -0.28639413447453 A507A-M587A -0.312569221684673 D555A-N588A -0.315396634498267 N570A-V577A -0.319861329896379 Q556A-M587A -0.333696817230043 N509A-A585A -0.337698334914196 I505A-N588A -0.338506141619871 F554A-K582A -0.358961687002032 V501A-I591A -0.375829818562018 D551A-R592A -0.379497225753301 I505A-L583A -0.380571581766014 L583A-I589A -0.387909729111858 L569A-I574A -0.405379250475744 I505A-A585A -0.439845435279735 N509A-N584A -0.507185395635109 D551A-I591A -0.509042380974843