[Wed Aug 24 18:12:11 2016] >Input file: TM4LP8ATD.pdb >TM segments: A44-72_A102-135 MAIDEN score = -35.0823 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V44A-F49A 0.99845154680712 Y68A-L112A 0.672087994841722 I53A-A127A 0.602286171044331 F64A-E116A 0.581476885510493 F64A-L112A 0.535903243737858 C119A-L124A 0.533662693415112 P104A-E116A 0.497196584765102 C71A-L108A 0.378517965337804 C71A-A109A 0.368725046112145 G120A-A128A 0.322478530247751 T111A-C119A 0.315547514112581 P104A-V113A 0.290090696905613 L124A-R129A 0.288048052452364 A67A-L112A 0.279947069855764 Y68A-L108A 0.262444026356915 L58A-G120A 0.261275262181742 C71A-E116A 0.254530458940589 T51A-T60A 0.241624523365557 N61A-M121A 0.241022153381371 T60A-L124A 0.239273721689513 C71A-P104A 0.222807181995456 I105A-N110A 0.219522219645501 P104A-L115A 0.212623356164304 M121A-R129A 0.208081771506713 F64A-G120A 0.203872669862573 T111A-L118A 0.188180261178616 Y57A-L124A 0.185990848637084 T54A-G120A 0.183583705352281 N61A-G123A 0.181577326318386 N110A-L118A 0.18029394368692 G72A-L112A 0.178403494188016 G106A-T114A 0.1764573339987 Y68A-A109A 0.1740146179046 A65A-G72A 0.171513407209682 L63A-G120A 0.165732296743727 T60A-T114A 0.165536909765066 L56A-G120A 0.16365024985681 I50A-I131A 0.159091571810372 G72A-N110A 0.150936867304907 A65A-I103A 0.14997782314747 W46A-T54A 0.147382572653209 A67A-T114A 0.147089124927402 F49A-A128A 0.141732071583336 I53A-Y132A 0.14000759416505 L69A-P104A 0.135634238084248 G55A-A128A 0.134816148152816 F49A-R129A 0.133184768529623 G55A-L124A 0.131958455765097 A65A-A117A 0.13179448037241 I50A-A128A 0.125366029319998 Y57A-A117A 0.123330188720968 A67A-P104A 0.122149070025551 V44A-A133A 0.121587276020744 A70A-L112A 0.117104983020366 I103A-N110A 0.116906309636199 G55A-G123A 0.116338414321966 L56A-L122A 0.116305199857036 L66A-L108A 0.115887393630253 A62A-G120A 0.115382941918393 I53A-L122A 0.114174273963325 A62A-A70A 0.113102093172818 P47A-T54A 0.109847663837384 A125A-A133A 0.1059853469162 Y57A-E116A 0.105899765458576 L52A-V126A 0.101879654371065 T54A-G123A 0.101530604113319 V59A-L124A 0.101130026071325 A67A-L115A 0.0993897089409415 N61A-L118A 0.0983290365478084 G123A-R129A 0.0962497716983171 N61A-A117A 0.0924168476402007 L52A-G123A 0.0922355105626318 L69A-N110A 0.0919308314488827 P47A-R134A 0.0918700363479394 A65A-N110A 0.091092215152611 L69A-L102A 0.0905267923134179 L52A-A128A 0.089950551919137 P104A-A117A 0.0895501034821571 A65A-L115A 0.0880127009129645 L69A-V113A 0.0876459238221696 E116A-L122A 0.086722553234356 I50A-G55A 0.0852983093969151 N61A-T114A 0.0842667789218199 A67A-T111A 0.0825870822639541 V59A-A67A 0.0812004610276071 I50A-Y132A 0.0811705490845487 A62A-C71A 0.0807485163090549 T51A-V59A 0.0797778314503752 T51A-I131A 0.079547909240441 P107A-T114A 0.0789177855205851 T60A-V126A 0.0784586576471913 I105A-T114A 0.0780045831950051 I53A-N61A 0.0775086513269045 L58A-A117A 0.0774989667108823 L66A-V113A 0.0773334448855738 A67A-N110A 0.0768935740976828 V126A-R134A 0.0765736887020017 A70A-T111A 0.0760145675388646 L56A-C119A 0.0756703268241345 P47A-A127A 0.0750331777373425 C71A-T111A 0.0748317611424225 V59A-C119A 0.0741914701815567 N61A-L69A 0.0728652111487182 T114A-L122A 0.0706082073249499 L63A-V113A 0.0701798680528753 I103A-T114A 0.0699776962049272 Y57A-F64A 0.0696205406791579 T60A-A127A 0.0689258318632766 L69A-I103A 0.0665768736151779 L56A-A125A 0.0661917543589517 I53A-L124A 0.0661065208244336 L102A-N110A 0.0656612722413339 A62A-A109A 0.0650664176807454 L63A-A109A 0.0640252923653735 L69A-G106A 0.0634538832588465 A67A-I103A 0.0627650383161376 T60A-L118A 0.0625562890015736 L122A-I131A 0.0623610466865196 V59A-A127A 0.0615623177081996 N61A-L124A 0.0606242587754533 L58A-A127A 0.0601144298594647 P47A-F135A 0.0586838323316554 T60A-M121A 0.0574449812981617 L112A-G120A 0.0570527172695672 G72A-P104A 0.0567082648730568 V59A-G123A 0.0565007403372793 L58A-G123A 0.0555628007158901 L115A-G123A 0.0554487500738988 L66A-A109A 0.055448392015669 T60A-L112A 0.0552268228029655 V48A-L130A 0.0542473716657179 F64A-T111A 0.0541278975660475 L102A-A109A 0.0538289645324015 I50A-F135A 0.0535858751303246 L58A-M121A 0.052356273389593 V113A-G123A 0.0519888552647482 L52A-Y57A 0.050118314498337 L52A-L124A 0.049868126707012 F64A-M121A 0.049806438612648 Y57A-A65A 0.0495897317590299 V48A-R134A 0.0494514722760873 N61A-L66A 0.0489361590792159 T54A-I131A 0.0489108954717361 S45A-T54A 0.0488479672541926 A65A-L108A 0.0448570859018944 L58A-E116A 0.0430450719100097 F64A-G72A 0.0402107952112454 N61A-V113A 0.0398609617819228 N110A-L115A 0.037122148839702 G72A-V113A 0.0364259598405674 T54A-L130A 0.0357965789020911 G55A-L63A 0.035328697561817 L63A-L118A 0.034994569639589 G55A-G120A 0.0349177470600925 T51A-R134A 0.0335546721169493 F49A-V126A 0.0333848785552457 I53A-R129A 0.0328967381794492 L56A-A128A 0.0327234344988687 A62A-L112A 0.0326869407445601 A65A-T111A 0.032663676636612 T60A-A125A 0.0323336297609857 V44A-I131A 0.0317714280250332 T54A-R129A 0.0263246795405743 L56A-I131A 0.0262171375739211 G123A-I131A 0.0248827138488892 L63A-G123A 0.0242365801453079 F64A-L118A 0.0238822827488638 L56A-N61A 0.0236975990497147 T54A-A125A 0.0227049908202164 Y57A-A125A 0.0218352851941734 P47A-L130A 0.0216677412134931 F64A-T114A 0.0215449963838088 L63A-G72A 0.0215433427214948 R129A-R134A 0.0195380953787747 L66A-E116A 0.0192939377547394 A70A-G106A 0.0190326356364041 I103A-T111A 0.0186117718137204 L63A-A117A 0.0184457929730728 A62A-C119A 0.0178116171864393 G106A-L115A 0.0176669704943313 V59A-E116A 0.0172989273636502 P104A-T111A 0.016345875216162 L58A-C119A 0.0158600007427172 Y57A-A128A 0.0157490197067292 A109A-A117A 0.0117996592287539 A117A-A125A 0.0117978518541894 A125A-R134A 0.0117013317005128 G120A-A125A 0.0111076374518539 F49A-G123A 0.00999908764674196 A125A-Y132A 0.00901799199995779 S45A-A133A 0.00831767088899049 A65A-C71A 0.00767776801550246 G106A-V113A 0.00716616130854852 A67A-P107A 0.00661292243654876 L122A-L130A 0.0063786490075568 T111A-G120A 0.00623208423467436 Y68A-E116A 0.00579917072755398 A117A-V126A 0.00558383358595549 I50A-L124A 0.00494175766158644 V44A-A127A 0.00288813016506673 T60A-V113A 0.00284533521761787 I53A-A125A 0.00254597917236762 F64A-I105A 0.00124196332402082 T54A-V126A 5.61779128561701e-05 V44A-F135A -0.000547185570144215 V44A-T54A -0.000716679356065342 L63A-C71A -0.000974977753255946 L63A-T111A -0.00347990382852781 A67A-C119A -0.0042097860925332 A70A-N110A -0.00464396459333662 L56A-F64A -0.00543494311198067 P47A-G55A -0.00719959087422017 L63A-T114A -0.00744486350540363 V48A-A127A -0.0074565385620573 T60A-E116A -0.00790940523351447 I53A-G120A -0.00831526762084833 T114A-G123A -0.00870271676740053 A70A-I105A -0.00874655494297327 A62A-L115A -0.00875721713557098 Y57A-G120A -0.00956837324064619 T114A-G120A -0.00978534351226146 A70A-P107A -0.0105365511182414 S45A-L130A -0.0110942508688474 A70A-P104A -0.0112961113881527 L108A-E116A -0.01164334366051 S45A-I131A -0.0123263932298872 A62A-A117A -0.0125635018261701 P47A-I131A -0.0139076255800352 I103A-A117A -0.0159729416371352 L56A-V126A -0.0160141470699617 A67A-I105A -0.016408242492754 T51A-L124A -0.0166565844417068 L66A-T111A -0.0188668316055054 G55A-A127A -0.0191538239585896 G72A-P107A -0.0198828764603864 W46A-R134A -0.0209015183761274 N61A-L115A -0.0229278705270897 A62A-V113A -0.0230463827217751 G72A-L102A -0.0236718311748074 L69A-L112A -0.0255066062292893 L66A-L112A -0.0256628480146279 C119A-A128A -0.0258996642811016 I53A-R134A -0.0259361442842461 C119A-A127A -0.0264050397547144 C71A-L115A -0.0264538937811625 N61A-A109A -0.0271566043576503 Y68A-I103A -0.0284746988002977 A65A-C119A -0.0304157399200371 W46A-A127A -0.0314296872492443 L63A-L112A -0.0319296680879533 I50A-R134A -0.0327529350961723 V48A-I131A -0.0353515076898177 A65A-V113A -0.0360788337244378 T51A-A128A -0.0386083874230899 L69A-A109A -0.0395816832624569 N61A-L112A -0.040278847819872 A65A-T114A -0.0404112787843065 A65A-P104A -0.0404182840337945 N61A-A70A -0.0406934126431979 A70A-V113A -0.0419888738811109 P104A-T114A -0.0436343887304567 A62A-E116A -0.044079671453543 Y57A-G123A -0.0457597929650579 C71A-P107A -0.0457759719366587 L124A-Y132A -0.0458225468498465 A65A-L102A -0.049696377503941 F49A-A133A -0.0497656054177318 L112A-M121A -0.0503684828644264 L69A-T111A -0.0512619757466313 I103A-E116A -0.0513520263886678 L63A-C119A -0.0517790203851707 G72A-T111A -0.0528294224136786 I50A-V59A -0.0534516356133956 W46A-A133A -0.0538059858336069 T60A-G123A -0.0539951918118962 S45A-R134A -0.0543788743566578 E116A-L124A -0.0551456167721946 T60A-L69A -0.055346138647427 S45A-F135A -0.055975180669752 T111A-E116A -0.0561356817217598 T54A-L63A -0.0563562391841717 S45A-Y132A -0.0565759838414031 V59A-Y68A -0.0570936786186271 L52A-R129A -0.0572994259256336 A67A-G106A -0.0576118314740484 C71A-N110A -0.0584304303337051 V44A-Y132A -0.0588975705177615 A65A-G120A -0.0592898642415252 Y57A-L63A -0.0610032160193463 M121A-L130A -0.0610645738004063 L58A-L124A -0.0625384586741315 G55A-F64A -0.0631489224779789 V48A-Y57A 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