[Fri Aug 26 17:08:52 2016] >Input file: TMA0A049E019S1D.pdb >TM segments: 174-187 MAIDEN score = -0.3126 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T178 -P184 0.233929061529246 T174 -W179 0.197376346952316 T174 -K180 0.156235474402298 A175 -Y181 0.143304525477807 G177 -R186 0.126444149837666 G177 -A183 0.106305504044198 T178 -E185 0.0990246919387432 T178 -A183 0.0967223792497719 T178 -R186 0.0941989835638591 T174 -Y181 0.0586932445806789 A175 -M182 0.0407804631395354 K180 -E185 0.03412456746408 K180 -F187 0.0146784578517509 T178 -F187 0.0136122769533011 A175 -K180 -0.00350537210063706 G177 -M182 -0.0143290409967207 V176 -A183 -0.0526831051892822 G177 -F187 -0.0561133665769358 V176 -M182 -0.0763410591939011 W179 -R186 -0.0797926031070082 K180 -R186 -0.0798527148196637 M182 -F187 -0.096001030340596 Y181 -R186 -0.100918320569676 W179 -P184 -0.109882345065917 W179 -E185 -0.144534860021025 Y181 -F187 -0.167118741644979 V176 -Y181 -0.366335026638137 W179 -F187 -0.380655753114877