[Mon Aug 29 17:59:08 2016] >Input file: TMA0A0H3M2L3M1G.pdb >TM segments: 408-459_ 501-514 MAIDEN score = -5.1146 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C415 -T439 10 C415 -L440 4.25357225526983 I424 -L432 1.1874707230586 C415 -T435 1.03056495738073 L453 -H459 0.786779871391027 V413 -L418 0.757704102401851 V413 -V419 0.702150943200161 L411 -L440 0.676107018630447 V412 -V417 0.54139125497746 A423 -V428 0.514876048999903 V412 -L418 0.467478333324056 L453 -Q458 0.45012265343224 V421 -A426 0.437863797263297 T420 -L432 0.428188575145676 R414 -L440 0.421518771851617 L411 -A443 0.37701412361299 I424 -G430 0.368839760701005 A409 -A443 0.368123551630033 T416 -L432 0.367378201929574 I437 -T442 0.332119770495456 V412 -L440 0.316506967816153 S503 -A511 0.297986327596879 T435 -L440 0.296045946108431 S445 -G509 0.294097579019361 T420 -A425 0.292250151310887 S445 -A504 0.287258157230298 L506 -A511 0.278801755556193 C415 -A436 0.269531284966363 L411 -G444 0.269163053558044 V417 -L422 0.265873684613906 P408 -V413 0.263123848182278 L411 -T439 0.249827446219268 A426 -S431 0.246282052967413 T442 -L505 0.241749250484396 L411 -T435 0.241267811786062 K450 -H459 0.238282313949748 I424 -A429 0.231998077726261 V412 -I441 0.221721962235956 V410 -C415 0.21603719895033 T416 -L440 0.212490284586253 I424 -T439 0.206165831548552 I437 -G509 0.20476617515367 A447 -D454 0.20277772473275 I441 -T513 0.199130523639001 T435 -G444 0.192803441664423 T416 -A426 0.191867829910299 A425 -T435 0.187383207105994 A423 -T439 0.184725243497798 A429 -T435 0.181835047625904 I424 -A436 0.181738460963251 A409 -R414 0.171230913368204 T442 -A504 0.168760605324554 T416 -G444 0.165794937566086 V419 -A434 0.164010041988497 T416 -T439 0.163502288946756 V417 -A438 0.160537683945151 V419 -A427 0.160263982956021 V412 -A447 0.158676471890706 I441 -S446 0.158603851170209 A434 -G444 0.154878222879661 I424 -A434 0.15378596693782 T416 -V421 0.150006670626224 A436 -I441 0.149274188109742 V421 -L432 0.147345399561345 T420 -A429 0.145893094058215 A504 -Q512 0.145878888634113 P408 -L418 0.141898049150594 T420 -T442 0.141767955247925 C415 -S431 0.139910356288705 G444 -L508 0.139488169944572 C415 -S446 0.139208778721745 T416 -S431 0.137963114825071 A409 -T416 0.137726873238435 V419 -S431 0.137439821015773 V410 -V421 0.136375829832887 V419 -V428 0.134743935360707 R414 -A434 0.132275429619498 A436 -G444 0.129838264477674 T439 -G444 0.128625692835978 T420 -I441 0.12594363141853 S452 -A504 0.124891682016846 V502 -L510 0.122031052398036 V413 -A438 0.119716019423565 I441 -L510 0.119260767065022 P408 -V419 0.119122039324749 L411 -T420 0.11596391305021 S431 -A438 0.115353142697125 A425 -A433 0.114598983977538 L411 -A449 0.11408272178356 A434 -A443 0.113792354087775 A433 -G509 0.113609132758255 L418 -A443 0.113582930271861 S446 -A501 0.112278077253445 A447 -A455 0.112278015220062 V421 -A434 0.112093357888277 A443 -L505 0.111321547755408 S431 -T439 0.11114218726603 V419 -L440 0.109507957230906 V421 -T439 0.109343627136108 A429 -A434 0.109150942744851 R414 -T442 0.108891198443107 L418 -T439 0.107537468619128 S445 -L505 0.106909175489275 V419 -G430 0.106407473158572 A438 -A447 0.106340253517728 A443 -A451 0.105689473713271 V413 -T435 0.102269379931188 A438 -A443 0.10191808746136 A449 -A504 0.100141554460132 C415 -I424 0.0998894127423342 G444 -A451 0.0998050102389589 T442 -G509 0.0997517221735494 S503 -Q512 0.0982825814951793 T439 -A447 0.0974081257437542 V410 -S446 0.0971101850634768 V412 -L422 0.0957891715945403 V417 -T442 0.0954657026202828 V413 -A436 0.0952801519468855 L418 -I441 0.0938017842234385 L440 -L508 0.0911091093137157 C415 -A434 0.0889093009847639 G444 -G509 0.0874206207831838 V417 -L432 0.0866807345376444 I448 -L505 0.0856719068228445 C415 -A423 0.0831291369135625 C415 -S445 0.0810321980888666 L422 -A429 0.0802295209056574 V419 -A438 0.0799042779040673 A443 -G509 0.079597898852743 A423 -A433 0.078889234969489 P408 -A443 0.078151278163519 V413 -I437 0.0775456550499951 I424 -S431 0.0757800438058365 A409 -I441 0.0755279402802591 L411 -V421 0.0748876277948987 I437 -L510 0.0744762246880373 T420 -A427 0.0733718062505715 V410 -A438 0.073203566498127 S446 -A504 0.0727998627232722 A436 -S445 0.0724932799639406 G430 -T439 0.0717975600651446 L418 -T435 0.0712547219492379 I437 -L506 0.0712521358374105 L411 -A434 0.070775859416278 A426 -L432 0.0702527353244404 V410 -T442 0.0691194338653318 T420 -V428 0.0684512586873065 A449 -D454 0.0672413473410223 A423 -A436 0.0667482763579885 R414 -T420 0.0667071774020922 A449 -L505 0.0658883670370928 A409 -A438 0.0650664176807454 A427 -A434 0.0649944844982813 T442 -L508 0.0649022909283072 V413 -G444 0.0630803768942489 L440 -Q512 0.0615339194492996 A423 -L440 0.0608856938110502 A447 -S456 0.0589995826681928 G509 -I514 0.0587901929040431 L422 -L440 0.0582144478977122 A409 -G444 0.0580286178754301 L505 -L510 0.0576154515681297 A438 -A449 0.0571997660220738 V417 -G444 0.0570910916080472 V419 -I441 0.0557240527949876 I437 -L508 0.0523577224056293 S445 -L453 0.0522600876319084 A433 -I441 0.0519598656094757 G444 -S452 0.0517196236104263 L422 -G430 0.0516631168680926 L411 -I441 0.0508884746282181 C415 -A447 0.0503515684497042 I448 -H459 0.0492460444086857 V419 -A443 0.0488526623070946 L411 -L418 0.0486272509774443 V410 -S445 0.0482008621593213 T442 -K450 0.0477877701457619 S446 -D454 0.0475754063453976 G444 -Q512 0.0469610051665938 A409 -L418 0.0467959237175393 V413 -T439 0.0449956673931412 A451 -H459 0.04406097823636 A501 -L508 0.0422153065655166 I437 -S446 0.0410650566494661 S446 -S452 0.0403902441433672 I437 -T513 0.0402775001064501 S445 -I507 0.0397602348296862 A501 -G509 0.0386872223870451 L422 -S431 0.0372353124390343 L422 -A436 0.0370928772314301 V410 -T420 0.0361363326283213 A436 -G509 0.0346342611455901 I441 -Q512 0.0337917815035889 A449 -L508 0.0330743960716558 S445 -D454 0.031927440782402 V419 -A436 0.0311044626415584 V412 -T442 0.0307509896609013 V417 -A425 0.0305566236331618 V412 -A438 0.0283864190705376 A423 -A434 0.0267272217635544 V417 -A433 0.0245924612660655 V410 -T435 0.0241883974263497 T420 -G430 0.0238883239068748 A409 -T442 0.0234901490000781 P408 -C415 0.0227579286919948 V417 -L440 0.0222975324816019 C415 -A433 0.0209095678493152 V421 -A433 0.0203999628182265 T435 -S445 0.0188649107822334 V417 -I441 0.0174875080342574 I448 -L508 0.017161633120109 A438 -I448 0.0170508563931486 P408 -V417 0.014710139981255 T420 -A443 0.0140037546947402 R414 -I424 0.0137629432359079 R414 -G444 0.0126432126274346 A438 -L505 0.0123366937258389 A409 -A447 0.0117832583236414 L411 -L422 0.0114201711108883 V421 -A429 0.0100706039021388 A436 -Q512 0.00932722370446037 V413 -A443 0.00791863898886036 T435 -S446 0.00706771787673066 T416 -A443 0.00697626733393619 A501 -L510 0.00458487038795408 A425 -A434 0.00435342464981847 V428 -T435 0.00376717488785361 A438 -G509 0.00123036165761281 A423 -S431 2.89572106599856e-05 V412 -A436 -4.47843437354489e-05 T435 -I441 -0.000977454409794021 V412 -A423 -0.00189645905296132 V413 -A423 -0.00227338200072724 G430 -A436 -0.00279877663892369 A449 -H459 -0.00312750695541286 C415 -A425 -0.00604297351121419 T442 -S452 -0.00668059843802959 T442 -A451 -0.00850265647015247 V417 -I437 -0.00929345832635953 I424 -L440 -0.00968375582410452 T442 -I507 -0.00970769356890022 L505 -T513 -0.0102146251877144 V421 -V428 -0.0110113208827824 C415 -T420 -0.0111077183172021 V410 -A436 -0.0119700811275845 L440 -G509 -0.0120280472446161 S446 -G509 -0.0128557076534395 I441 -A511 -0.0152889783861787 L418 -L432 -0.0159752464851461 S445 -Q512 -0.0169140221998278 V413 -I441 -0.0170623863151258 A409 -T420 -0.0172418478369623 V412 -I437 -0.0175241530724826 A409 -V417 -0.0179872241959678 V428 -A434 -0.0194609015470837 A449 -A501 -0.0202985627369783 L418 -L440 -0.021723691541089 R414 -I437 -0.0217933407503286 A451 -Q458 -0.0224781117126813 V428 -A433 -0.0227440231597975 V413 -L432 -0.0228488162645366 A409 -V419 -0.0238358664455052 P408 -L440 -0.0239168043891116 V502 -A511 -0.0248511729896448 T442 -Q512 -0.0254131612613713 V419 -A433 -0.0255373549698942 V417 -A443 -0.0269853926317782 V417 -A426 -0.0284768943107429 V410 -L440 -0.0292896820060413 A426 -T435 -0.0315105894242185 I448 -S456 -0.0329718849649221 T416 -T435 -0.0330782543160613 I441 -I448 -0.0348115041743196 L505 -I514 -0.035363656091679 I424 -T435 -0.0354840274657384 S445 -K450 -0.0356241316166073 T442 -A501 -0.0360884965269046 V413 -A425 -0.0370471209924235 L411 -S445 -0.0376285329123771 A443 -K450 -0.0381533508966299 A504 -T513 -0.038287976521889 A449 -Q458 -0.039213805495705 G444 -L453 -0.0394683703804874 L411 -A436 -0.0398551863222796 S445 -L510 -0.0407136554353995 G430 -A438 -0.04153664831993 A449 -L457 -0.0424947121612771 T439 -I448 -0.0425510041906125 T416 -A427 -0.0426840695599139 A427 -T435 -0.0440704866309612 V417 -A434 -0.044731755940139 R414 -A425 -0.0449196952990984 I441 -A449 -0.0470538515993422 T420 -T439 -0.0480136493815344 A427 -A433 -0.0493000624753623 V421 -A438 -0.0501060905500017 G430 -I437 -0.0502578588149536 I448 -A504 -0.0512904321843335 R414 -S446 -0.0527211353334844 V413 -I424 -0.0527691039393474 L422 -T435 -0.0530508749209098 T420 -A436 -0.0539642013582355 A423 -A438 -0.0551920734163804 L422 -A434 -0.0553108099828137 A433 -A443 -0.0553999194049068 A425 -A436 -0.0570193212418091 D454 -H459 -0.0572014859651506 A409 -L440 -0.0590633790177306 V412 -V421 -0.0593225619344162 I424 -A438 -0.0598920094042583 V410 -T416 -0.060212886115937 P408 -R414 -0.060449756632682 L506 -I514 -0.0607001316718683 K450 -S456 -0.0615332848584483 V410 -A447 -0.0623479534150482 P408 -T439 -0.0661440304450966 S446 -L505 -0.0686475201101624 L418 -A426 -0.0714881034894388 T416 -G430 -0.0715398414234176 V417 -S431 -0.072999653303137 V419 -T435 -0.0731201350202424 V412 -T435 -0.0752438582894777 G444 -L505 -0.0773610555748068 V419 -I437 -0.0785731895147963 L505 -Q512 -0.0792407043051124 P408 -G444 -0.0795650889529456 I441 -L508 -0.0796302038985182 P408 -T416 -0.0802004535562708 S446 -L508 -0.0802499517552659 A409 -T439 -0.081513770158038 V412 -S446 -0.0816675941398988 T420 -A426 -0.0828614260739838 I437 -L505 -0.0852319182714849 R414 -A433 -0.0862861447883421 V413 -T442 -0.0866000572749179 T442 -L506 -0.0874763766915747 L411 -A447 -0.0877540209967904 R414 -A438 -0.0901995644077371 L418 -A436 -0.0912075076915051 L411 -I437 -0.0924917319324543 A409 -C415 -0.0924962624762551 A409 -S446 -0.0926425591547604 A443 -S452 -0.0928498550859853 T416 -A436 -0.0954240127318766 A425 -G430 -0.09560409043925 I448 -L457 -0.0956459585120486 L432 -T442 -0.0963123600195905 A443 -L508 -0.0965726030019027 R414 -S445 -0.0966752644883631 S452 -Q458 -0.0967603669951678 A433 -T442 -0.0974193715548393 C415 -A438 -0.0977445342111727 T416 -A434 -0.0981502901130207 A436 -S446 -0.100672273482834 I441 -L506 -0.102198849083504 S446 -A455 -0.104560823511753 L422 -T439 -0.104927242439135 V421 -I437 -0.106115733887307 I437 -A447 -0.107648814404032 V410 -T439 -0.107819621608213 K450 -A455 -0.107964905779115 V410 -I448 -0.107975090239969 T416 -A423 -0.108734049385088 S445 -A501 -0.108748478157736 V421 -G430 -0.109018056385521 R414 -S431 -0.109112394743804 V412 -S445 -0.109834177850515 S503 -G509 -0.11003453710273 I437 -A443 -0.110360154985942 S431 -L440 -0.11195306714375 V502 -G509 -0.112089212610709 V412 -G444 -0.112234727793965 A438 -G444 -0.119922598665466 T435 -A443 -0.120104015934344 R414 -L432 -0.120339739295796 C415 -I437 -0.1218184194863 I448 -D454 -0.122948952991773 I441 -L505 -0.123592189155339 R414 -I441 -0.123817833261076 L440 -I448 -0.12600643188265 S445 -A511 -0.12617230906693 I441 -K450 -0.126312321296967 V413 -T420 -0.131873667887033 V410 -I437 -0.13211369103842 I441 -I507 -0.136109049929095 L422 -A433 -0.137258915999463 T420 -A438 -0.138606968750877 T420 -I437 -0.139259633567322 I437 -Q512 -0.140815564838987 L440 -A449 -0.143886403526814 V410 -G444 -0.145886069031792 R414 -A443 -0.146302006341061 L411 -I448 -0.146593695287136 S445 -L506 -0.147355912854954 I441 -A504 -0.148429492069464 S431 -I437 -0.148897869610811 S445 -S452 -0.152041047985701 T416 -I424 -0.152376246561492 A434 -T442 -0.154933255398503 L418 -A438 -0.156354712309764 L432 -I441 -0.156370882756701 T416 -A425 -0.157700895389696 V419 -A425 -0.159998243652011 I424 -I437 -0.16080494945704 R414 -A447 -0.165458831602786 I437 -S445 -0.166066767828263 L411 -S446 -0.166269342748773 R414 -V421 -0.167183508524758 T416 -A433 -0.167486841069298 A433 -L440 -0.168295353273865 G444 -K450 -0.168719538049395 L432 -L440 -0.170886958168538 K450 -L457 -0.171892059503636 V502 -I507 -0.173020491060578 L411 -V417 -0.181310798746312 L418 -A425 -0.182247910431872 R414 -A423 -0.183153386333108 A425 -L432 -0.183454468409076 L418 -A423 -0.184054236746304 V421 -A436 -0.185448210970509 L440 -A447 -0.186146883127171 R414 -L422 -0.187991945225007 V410 -K450 -0.188149622926526 R414 -T435 -0.188192289395943 L422 -L432 -0.188998057088907 T442 -A449 -0.189405123953267 V417 -I424 -0.189722211577846 I441 -G509 -0.190979868711135 T416 -T442 -0.191521051458633 L411 -T416 -0.191577924936157 T416 -A438 -0.19183801259634 K450 -Q458 -0.192080824429556 A451 -L457 -0.192293746808397 A504 -A511 -0.194213605614767 A438 -S446 -0.195718659153817 A423 -A429 -0.196304186719293 V419 -T439 -0.197953928715462 A434 -I441 -0.200175270921469 A504 -L510 -0.200852485242443 A449 -S456 -0.20153645814807 A425 -S431 -0.202240472290844 S503 -L508 -0.202728514962567 R414 -A436 -0.20385693937818 L508 -T513 -0.207417179718289 S445 -A451 -0.208653622139714 L432 -A438 -0.209067660669228 G430 -T435 -0.209264120262086 S452 -L457 -0.209659140937308 V421 -T435 -0.212273549060352 V410 -V417 -0.212858473105515 S446 -L453 -0.213519310957073 I448 -A455 -0.213945272407887 A427 -L432 -0.214434931305147 V412 -T420 -0.214441549749812 V410 -I441 -0.214537785462478 A438 -S445 -0.214992555826028 V417 -T439 -0.215098516778316 T439 -S446 -0.217731438423567 V419 -I424 -0.218284647795153 T439 -S445 -0.219068880134476 V421 -L440 -0.220610374797676 A423 -T435 -0.22070354078552 T420 -A433 -0.223542684167029 T420 -A434 -0.223805681941216 C415 -L422 -0.224048442370183 A433 -T439 -0.224418104723488 L432 -T439 -0.224628862563923 C415 -V421 -0.227422774533339 V412 -T439 -0.228486597009284 T420 -T435 -0.228623388075788 A436 -A443 -0.232219620289242 L411 -K450 -0.232255769092438 I507 -Q512 -0.234841740501817 L506 -T513 -0.236781820636702 V419 -A426 -0.240895453441133 I437 -G444 -0.240953017222294 A447 -L453 -0.24109240451736 L440 -S446 -0.241771867660538 A449 -A455 -0.242364281468849 T420 -S431 -0.245122035594856 S445 -L508 -0.246765490213513 A443 -A449 -0.249235733156583 C415 -G444 -0.25450791073517 A504 -G509 -0.254515080169047 V419 -L432 -0.255200378612211 I441 -A447 -0.257376213751675 V410 -L418 -0.258111953075163 S503 -L510 -0.261005816861608 A501 -I507 -0.264388475781752 V412 -V419 -0.26595009956346 V417 -T435 -0.268959452183175 S452 -H459 -0.269070438492756 T442 -A447 -0.277089234239499 L506 -Q512 -0.281239707890437 A423 -L432 -0.287436434745961 L418 -I424 -0.287527458075309 T416 -I441 -0.288572554941068 A434 -T439 -0.28980228235138 V413 -L422 -0.291043526185113 L411 -A438 -0.29161881243376 V417 -A423 -0.29450902831199 R414 -T439 -0.294599717498726 L422 -A427 -0.302840214403605 A501 -L506 -0.30304058206351 T420 -L440 -0.30412267645148 L411 -T442 -0.310011075401027 I507 -I514 -0.311226994294399 V502 -L508 -0.311577162557978 L505 -A511 -0.316643573636023 V412 -A443 -0.317353304875162 A434 -L440 -0.318101723656554 I424 -A433 -0.318736961960674 T416 -L422 -0.332346559203305 V421 -S431 -0.332367690179079 L411 -V419 -0.333245426113872 V413 -V421 -0.34104857497656 A436 -T442 -0.343578581197816 V410 -V419 -0.348722878908822 C415 -A443 -0.349646107699458 S431 -A436 -0.350162552232641 L440 -S445 -0.353192403007072 V417 -A436 -0.353453531548283 V421 -A427 -0.362564263429408 V410 -A443 -0.371983965475447 T435 -T442 -0.37413651164847 I448 -L453 -0.377763876274769 L432 -I437 -0.385920400755036 T442 -I448 -0.39616148418941 A443 -I448 -0.396839032782912 L508 -I514 -0.400173817848867 L422 -V428 -0.407393463588562 V413 -L440 -0.408754477896349 I507 -T513 -0.409106411804494 T416 -I437 -0.410981463896339 A433 -A438 -0.425093865739345 S446 -A451 -0.431583499174355 A423 -G430 -0.434752272836856 G444 -A449 -0.442016020141644 A451 -S456 -0.527777941975005 C415 -L432 -0.531419237834046 A447 -S452 -0.547079391858375 C415 -T442 -0.547996413730337 R414 -V419 -0.579209970503592 C415 -I441 -0.765551305869817