[Fri Aug 26 17:13:51 2016] >Input file: TMA0A0H4Y1A0M1D.pdb >TM segments: 154-167 MAIDEN score = 9.3955 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I161 -V166 8.70217733661855 V162 -Q167 0.717010014177772 L160 -V166 0.687242484360003 P159 -Q167 0.589604998142564 I161 -Q167 0.172975283854628 M155 -L160 0.0592709993502774 L160 -Q167 0.0187682335429757 P159 -G164 -0.0046975157691781 L158 -V166 -0.0111315748672389 E157 -Q167 -0.0314845502492143 K154 -P159 -0.0766750042962201 P159 -V165 -0.0881099595358021 L158 -V165 -0.104198375508019 E157 -V162 -0.158372000592278 L158 -D163 -0.180632622809178 P159 -V166 -0.191368877969759 L158 -Q167 -0.258743549188338 L160 -V165 -0.446154753729272