[Mon Aug 29 16:51:54 2016] >Input file: TMA0PTK5M3G.pdb >TM segments: 137-149 MAIDEN score = -2.2312 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A139 -V145 0.142343727845036 V141 -G148 0.136253207863615 A140 -G147 0.066724549816727 V138 -R143 0.0427319849489536 V141 -L149 0.0180856645006271 A140 -G148 0.00458785773053005 V138 -P144 -0.013524165795455 R143 -G148 -0.0182946360945042 A139 -P144 -0.0515643652478328 A139 -L146 -0.122750449144042 V141 -G147 -0.133934445483531 L142 -L149 -0.197747575030927 A140 -V145 -0.201473076388547 P144 -L149 -0.244203140867144 R143 -L149 -0.246906570690496 A140 -L146 -0.257861917531295 L142 -G148 -0.340851963423015 L142 -G147 -0.357972679571468 V141 -L146 -0.454809802274537