[Fri Aug 26 17:38:31 2016] >Input file: TMA3J2G8M3D.pdb >TM segments: 113-154 MAIDEN score = -8.6314 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I146 -L154 1.22234561267836 I149 -L154 1.17770306848472 I125 -V153 0.952617402415102 I146 -D151 0.80169715177592 Y120 -F128 0.624306149355027 F117 -W148 0.575285430367129 Y120 -I149 0.523790248453428 S123 -F128 0.507727292477695 I125 -L154 0.455576510488966 Q137 -K144 0.400643266218265 K144 -I149 0.335285767417997 Y120 -V130 0.333622909720571 F117 -I149 0.312762417480287 P113 -K144 0.300439082960173 P113 -W141 0.24645349547998 Y120 -A129 0.239295412007554 P131 -Q137 0.199206086916196 Y120 -I125 0.195332896531357 Q118 -F128 0.188459136722716 K126 -D151 0.187961571767556 Y120 -S132 0.185454394041478 T143 -D151 0.163045997223979 S132 -F140 0.158000934437853 Q137 -P142 0.14531944612895 T143 -L154 0.142319307669956 F128 -S150 0.142135911166376 P113 -Q118 0.141374507503308 A121 -S150 0.140848939423401 V130 -Y136 0.138119453051603 P131 -P142 0.137945827703188 N122 -A129 0.133845868143872 F140 -F145 0.133565803521788 Y136 -I146 0.133168574196013 I119 -I125 0.13262237848095 A121 -F127 0.129464921630572 K114 -F145 0.129332035579936 F117 -K144 0.127194056347413 L138 -K144 0.126293373998552 K114 -I119 0.124461063291759 Q118 -F124 0.122598680951255 L138 -I146 0.120789797609296 A129 -S150 0.119595194596941 S132 -T143 0.115423041063602 S132 -L154 0.11460803695662 F116 -F128 0.114485633154649 T143 -S150 0.109066643264104 A129 -Q137 0.10856706883365 F116 -S132 0.108009456489176 A129 -Y136 0.105892049743345 I119 -I146 0.104592463065987 I146 -V153 0.0996616095278666 P142 -L154 0.099350671000447 F135 -F145 0.0978478055676697 F145 -D151 0.0977941139399752 W148 -L154 0.0964703435137064 S132 -K144 0.0960715613778835 I147 -L154 0.093269235495677 Q137 -F145 0.0928601543353027 F116 -K144 0.0890259954665791 F145 -L154 0.0848554284511063 Y120 -P142 0.0830071293802752 P113 -I147 0.0791368703512654 I119 -I147 0.0782615701123668 V130 -L154 0.074667346727846 S132 -W141 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0.0278737588520519 F128 -P142 0.0278135398038017 S123 -L154 0.0277972477489706 I119 -S132 0.0261034447130282 I125 -S150 0.025616566914656 F135 -T143 0.025267344253829 I119 -W148 0.0249568734975685 Q118 -I125 0.0246011698994115 K126 -I146 0.0237448010981827 Q118 -F145 0.0232607669751088 N122 -S150 0.0221273565036868 F140 -W148 0.0216336175631482 F116 -L154 0.0205282115791392 Y133 -W141 0.0205024929455067 W141 -L154 0.0199153876314417 F117 -L154 0.0190059098405104 F117 -I146 0.0190033883737998 S132 -I149 0.0184569781940844 F134 -W141 0.0182085582381033 F128 -I149 0.0172822005675317 P131 -L138 0.0159816755538245 V130 -F135 0.0154416051146857 F116 -S150 0.0142193988131766 I119 -F127 0.0136081988510448 F124 -S150 0.00976997649041043 S132 -I146 0.00965465162733281 F124 -P131 0.00586942966889237 A121 -I152 0.00362294042366162 A129 -I146 0.0026638927940065 Y133 -F140 -0.000280352832712438 F124 -S132 -0.000977482969951371 Y133 -P142 -0.00376883768777958 F117 -P142 -0.00386729689617271 K114 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