[Fri Aug 26 16:47:52 2016] >Input file: TMA5KRN8M1D.pdb >TM segments: 8-46 MAIDEN score = -5.0186 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V26 -G35 0.671134407316923 E16 -I21 0.644938303194328 I21 -A31 0.620473060204178 I25 -C30 0.609945734235024 I25 -F33 0.595289423210481 R24 -F33 0.465675340428109 R24 -I29 0.450999921009142 K27 -G32 0.444020776607207 K27 -F33 0.416898049674456 A22 -I29 0.390063996994963 V26 -T34 0.380771376807218 R24 -C30 0.363153090157963 I25 -A31 0.358404510264908 R24 -T34 0.319824557812818 R24 -G35 0.316450428079452 A22 -C30 0.312063584143186 G17 -A31 0.289785108089968 R24 -G32 0.273553682200259 G28 -F33 0.227661680844901 K27 -A38 0.207889352513215 G17 -I25 0.196766620471327 G35 -L43 0.177980387540009 M19 -G28 0.176513814670793 A10 -E16 0.16387438150015 G12 -A22 0.161636831452177 G11 -G17 0.157274786927163 A22 -A31 0.143607106536108 L20 -I25 0.142095818395136 M19 -A31 0.139995380294865 G28 -G35 0.137883078437713 W18 -A23 0.128468759145882 W18 -K27 0.124924393871867 V26 -F33 0.122412027394639 G17 -R24 0.119921804300202 G17 -I29 0.119729872526668 R24 -A38 0.117512042859547 I21 -G28 0.115479805810455 L9 -L20 0.115084649888364 G11 -M19 0.105590523611075 A22 -G35 0.102897733258023 L20 -K27 0.102701596655622 V26 -L39 0.10123429629756 A22 -T34 0.101183760802408 A23 -A37 0.0901311904271771 I25 -L39 0.0881290497090828 L9 -M19 0.0868079331274862 G35 -G44 0.0860349898428918 G32 -A37 0.0858835010753483 G17 -G32 0.082763857696964 A38 -L45 0.0814668306922184 S8 -A14 0.0786698549147913 A37 -L45 0.0704095488769418 R24 -A31 0.0658691073854429 A22 -P36 0.0625378596031201 A37 -F46 0.0606570266201356 G32 -A38 0.0600815141589937 L39 -L45 0.060024544065902 L9 -G17 0.0594702403024142 G17 -C30 0.0591191435709515 L20 -G32 0.0574804513794734 G12 -L20 0.0567080189015314 P36 -L45 0.0528242608868394 A14 -A31 0.0524163918034062 E16 -I25 0.0514289243864319 M19 -F33 0.0514026187710681 C30 -G35 0.0497292215547773 V26 -A38 0.0473108610103807 L20 -G35 0.0446004493030072 I21 -F33 0.0417285016177191 A10 -G17 0.0404031962660447 A10 -L20 0.0374107446390775 A14 -R24 0.0337788694969854 K27 -P36 0.0324211749156333 A14 -A22 0.0322794194983622 I21 -G35 0.0298337221592506 M19 -G32 0.0294053796811387 A31 -P36 0.0275237608924619 P36 -F46 0.0268042859362185 L13 -W18 0.0219823691343377 W18 -F33 0.0189238963951905 T34 -L42 0.0158525941040786 L9 -A14 0.015339726144747 M19 -R24 0.0140038738400645 M19 -I25 0.0139941235107326 I25 -T34 0.0110355178272563 K27 -L39 0.010878505441573 G17 -V26 0.00945402868795053 A23 -G32 0.00795906568945259 K27 -T34 0.00655162991900449 I29 -P36 0.00441441965214384 C30 -P36 0.00295864534543355 L20 -T34 0.00255115956183705 K27 -A37 0.0014862740101913 I25 -A38 -7.60190980986231e-05 S8 -E16 -0.00596251151477833 A10 -M19 -0.0109564534285307 E16 -R24 -0.0111989592705275 T34 -S40 -0.01567776334119 L13 -A22 -0.0175959926930611 R24 -A37 -0.0179341904823325 T15 -I25 -0.0183808442315527 T15 -R24 -0.0216321915424496 I29 -G35 -0.0234087997582293 L20 -G28 -0.0282749226606522 A14 -A23 -0.0289042560444868 A23 -P36 -0.0307585320993562 S8 -T15 -0.0319564330825515 E16 -A31 -0.0339608731812553 W18 -G32 -0.0381326996331662 A38 -F46 -0.039795644519554 A37 -G44 -0.0406807284123119 P36 -G44 -0.0424997116365098 M19 -C30 -0.0440963455890442 E16 -A22 -0.0445311852149848 S8 -G17 -0.0451650737008051 T15 -I29 -0.0456798257163 A23 -G35 -0.0481583710710805 G28 -P36 -0.0502931066133423 G11 -L20 -0.0532430271274524 G17 -F33 -0.0536203299060766 T34 -L41 -0.0645842355021933 V26 -S40 -0.0673684024981966 R24 -L39 -0.0685850487609334 I25 -A37 -0.0709508362079934 F33 -L39 -0.076269860592463 W18 -R24 -0.0774567304521452 G17 -A22 -0.07867182049457 I25 -G35 -0.0841102797273106 W18 -C30 -0.0847349960955173 L20 -I29 -0.0848486485846786 A23 -C30 -0.0852793746709799 A10 -T15 -0.0870274326919505 A23 -T34 -0.0896021971483911 L39 -F46 -0.0909882073800908 T15 -A23 -0.0923454855274302 L13 -I21 -0.0926546245638721 G12 -I21 -0.0961719258953453 F33 -A38 -0.0973211126686668 A10 -W18 -0.100588490720976 T15 -A22 -0.101053967913377 I25 -G32 -0.102086811593827 V26 -P36 -0.107856780304532 L20 -C30 -0.107999956973704 A22 -K27 -0.111753030745253 G28 -T34 -0.112608209256129 A23 -I29 -0.113701157111402 A22 -F33 -0.114159372287397 L9 -E16 -0.115540622364586 P36 -L43 -0.121530037715914 R24 -P36 -0.12159571772024 G12 -M19 -0.122677277331387 I21 -T34 -0.123661451543755 W18 -G28 -0.127878596713251 G11 -W18 -0.129551735154059 M19 -K27 -0.130498719208953 M19 -V26 -0.130640557024224 L20 -F33 -0.130805537863474 W18 -V26 -0.131263831693099 A14 -L20 -0.13528153021983 I29 -T34 -0.136331522775323 A23 -F33 -0.141159319931261 G35 -L42 -0.146301905190089 A37 -L42 -0.155857750438116 G35 -S40 -0.155951604850752 P36 -L41 -0.15614431434412 V26 -A37 -0.15676324942411 W18 -A31 -0.171761591274553 A23 -G28 -0.177652976302055 V26 -G32 -0.188355846796428 T34 -L39 -0.194524828282187 L13 -L20 -0.196206422132542 L9 -W18 -0.211220972660721 I25 -P36 -0.216297044001923 A22 -G32 -0.219737999230838 L20 -A31 -0.222756095611683 L9 -T15 -0.226139087118604 G12 -W18 -0.231157548049591 I21 -G32 -0.240005691336436 E16 -A23 -0.243547772971833 A23 -A31 -0.24877477866374 L41 -F46 -0.250958084274954 A38 -L43 -0.257074525416042 G17 -A23 -0.260336328655981 G35 -L41 -0.266466901253984 K27 -G35 -0.266884083922085 G11 -E16 -0.268241101452409 A38 -G44 -0.270708652735298 I21 -I29 -0.276188110899812 S40 -F46 -0.288679431904059 T15 -I21 -0.298497267019869 A14 -I21 -0.306943547635387 S40 -L45 -0.306967764106604 A37 -L43 -0.317994655401354 T15 -L20 -0.318721742531454 S8 -L13 -0.32321280467047 A14 -M19 -0.337785361362309 W18 -I29 -0.341189945810118 I21 -K27 -0.351641738827191 W18 -I25 -0.356987457571034 V26 -A31 -0.3589496082946 A22 -G28 -0.359701417975698 I21 -V26 -0.36000924806727 P36 -L42 -0.38576389720096 M19 -I29 -0.394084233374434 L39 -G44 -0.404030258383266 G12 -G17 -0.404944003442622 L20 -V26 -0.408246009076468 L13 -M19 -0.480657131778168 I21 -C30 -0.500539676990902