[Mon Aug 29 17:11:15 2016] >Input file: TMB7VNW1M1G.pdb >TM segments: 160-190_ 221-236 MAIDEN score = -12.7209 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T184 -I222 1.52221878231185 L183 -I222 0.779484067506433 V180 -I226 0.758896975662754 A176 -T229 0.716656267916481 Y175 -A233 0.672040479631903 L183 -A224 0.6044992749224 G187 -I222 0.596726655810198 P179 -G225 0.592219087819087 R182 -G225 0.581504234561239 L183 -T221 0.576534961983889 V173 -A233 0.441999289436604 R182 -I222 0.434264623438075 V172 -M236 0.425685131715353 I177 -M232 0.415079820778046 I177 -T229 0.407108545871923 V172 -L234 0.388151948751233 L186 -T221 0.377184087825229 L161 -G168 0.32986312250645 R182 -N227 0.324425144183063 Y175 -M232 0.323603195401549 T184 -T221 0.318107794978088 I181 -G225 0.316218526462793 V172 -A233 0.315960971153814 V180 -M236 0.310810219070969 Y175 -R182 0.309416965742818 A176 -Q228 0.304741103753393 V180 -I222 0.300951168056898 Q228 -M236 0.275574783057381 G168 -Y175 0.256042588317271 I222 -N227 0.253009501812624 P179 -L186 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