[Fri Aug 26 17:26:56 2016] >Input file: TMB9GL93M2D.pdb >TM segments: 403-422 MAIDEN score = -1.6894 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L410 -G416 0.359243230262701 Q403 -K413 0.325164437501132 G404 -M409 0.307033107772506 G416 -L421 0.2801336447182 G416 -D422 0.249037953675505 M409 -D422 0.214817110753045 L410 -P420 0.189073852258695 I406 -G416 0.184063734738904 E417 -D422 0.181246659424558 G404 -G416 0.174581271569522 G404 -G412 0.157687965449556 H411 -E417 0.152849912988272 K413 -D422 0.148121392093215 S405 -G412 0.138852333965303 S405 -K413 0.121419880695472 S408 -L421 0.112034957861896 M409 -P420 0.103303663062238 Q403 -R414 0.0930874039176786 G404 -K413 0.0916568370557634 L410 -V419 0.0770463383258246 S407 -R414 0.0749699444165361 Q403 -L421 0.0745013083814694 G415 -P420 0.0739728229275691 S407 -G416 0.068883919099469 G412 -E417 0.060912109260244 R414 -V419 0.0527315921826662 M409 -G415 0.0489894427928483 H411 -L421 0.0458757162661657 S407 -D422 0.0437264382460978 R414 -P420 0.0387591055717746 Q403 -H411 0.0370102829250876 H411 -D422 0.0362710069710905 S408 -G416 0.0317327438948697 G404 -L421 0.025336483361547 L410 -E417 0.0188541873118728 S408 -R414 0.0169598295593274 M409 -G416 0.0104550709891716 I406 -P420 0.0100895478387506 G404 -H411 0.00980190017392779 Q403 -G412 0.00647554983526133 I406 -E417 0.00249175805566182 S408 -G415 -0.00154247062234614 S405 -G416 -0.00294360199263366 G412 -L421 -0.00809218044188764 S405 -L421 -0.00823242225053811 S407 -E417 -0.00829531389254817 G412 -R418 -0.0130756447567935 Q403 -M409 -0.0138571275430381 I406 -V419 -0.0142392863664824 S407 -G415 -0.0187688978539564 I406 -R414 -0.0300305681476511 L410 -D422 -0.0399386686521989 I406 -G415 -0.0406371946088964 M409 -R414 -0.0548666955501615 I406 -L421 -0.0568075388603919 K413 -R418 -0.0594895091290333 S407 -K413 -0.0595871337704701 Q403 -G416 -0.0614763722240594 M409 -R418 -0.0621672569162737 S407 -R418 -0.0655785744382444 S407 -L421 -0.0838714446497253 S405 -R414 -0.0952631910633157 S408 -K413 -0.0992394280954785 R414 -D422 -0.102273433574018 M409 -L421 -0.103235141470215 S407 -P420 -0.103772203666106 G404 -L410 -0.105990622979946 I406 -R418 -0.107441130839754 Q403 -P420 -0.113831941907561 Q403 -S408 -0.117808823952624 G415 -D422 -0.118274176266397 S405 -H411 -0.120177626539817 I406 -D422 -0.122607618446128 K413 -V419 -0.12371253544366 M409 -E417 -0.127855324553704 K413 -P420 -0.133588514754099 H411 -R418 -0.15050221284797 L410 -G415 -0.153801825137224 L410 -R418 -0.181399969095452 K413 -L421 -0.191305094725488 R414 -L421 -0.195718091545689 S407 -G412 -0.20462184235478 I406 -H411 -0.229944274400886 H411 -G416 -0.259480020153716 I406 -G412 -0.266896724319732 Q403 -L410 -0.267061899646003 H411 -P420 -0.278212464542089 I406 -K413 -0.306177922298097 S405 -L410 -0.306203392328114 G415 -L421 -0.338037879236843 L410 -L421 -0.410766761131118