[Fri Aug 26 17:39:45 2016]
>Input file: TMC0H9C9M5D.pdb
>TM segments:  544-565_ 593-605

MAIDEN score = -12.8675

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
L558 -P597 		1.82453985598077
A550 -Y555 		0.496537988207661
Y555 -A598 		0.474106775297912
L558 -S596 		0.451224121747257
H554 -S596 		0.392422698841514
A559 -S596 		0.332747115849139
P597 -S604 		0.31751993622135
S547 -A605 		0.315978758159559
G551 -A602 		0.294692840435052
S596 -A602 		0.281271477128026
S547 -S604 		0.264129297324795
G551 -A559 		0.263318247044683
L553 -P597 		0.239129217973893
H554 -S604 		0.231199640229348
S547 -Y555 		0.228399502221339
W563 -G593 		0.22404581206359
A559 -G593 		0.221217504248397
G551 -F556 		0.215316916100726
S547 -V601 		0.212078274902045
H554 -Y594 		0.197827098769788
F557 -A598 		0.194936363412401
W563 -P597 		0.193403573494834
G551 -Y594 		0.189965375690548
W563 -G595 		0.186525294824187
S596 -S604 		0.179317402280796
F557 -G593 		0.174292236340116
H554 -P597 		0.169447813823587
S547 -P597 		0.16298414857685
L558 -C565 		0.159164057894234
F556 -P597 		0.156338058598967
H554 -G595 		0.155597535198033
C546 -Y555 		0.152591092893389
L552 -S604 		0.145094092100106
F545 -S604 		0.137886821700975
S547 -A602 		0.13695546847487
C546 -S604 		0.134511947640714
A550 -A559 		0.133275838795397
I549 -I603 		0.126631183263257
L552 -Y594 		0.124512815656725
A562 -V599 		0.124294146807784
G595 -A602 		0.115897358330988
Y555 -Y594 		0.112237086555289
A598 -A605 		0.109885195056099
A550 -A598 		0.109256028626478
A560 -A598 		0.109144558415215
M564 -P597 		0.104375448698897
G595 -V600 		0.102641927422787
A550 -V599 		0.0996299179419493
A560 -V599 		0.0990816912798396
A559 -Y594 		0.0986158711675214
G551 -A605 		0.0964792046283228
F556 -G595 		0.0958519768928956
C565 -S596 		0.0939918953548653
H554 -V600 		0.0928489924019474
A550 -V601 		0.0914133986162978
L544 -I603 		0.0871319795776139
L553 -V601 		0.0867526520116637
F557 -G595 		0.0846846668377519
F556 -C565 		0.0828370789806847
V599 -A605 		0.0797730721180101
I548 -A602 		0.0788332331067108
F561 -Y594 		0.0772830598966014
L544 -S604 		0.070813515622596
Y555 -M564 		0.070324437151575
H554 -A562 		0.0693366033143019
F561 -A598 		0.0689864542010779
A560 -S596 		0.0689220368545431
L558 -A602 		0.0657420778670176
A550 -A605 		0.0637637783176115
A550 -A560 		0.0629504564110446
I548 -V601 		0.0599230962229393
Y555 -S604 		0.0566819579470232
A550 -A602 		0.056023672744673
A562 -A598 		0.0558336718255052
H554 -G593 		0.0545706415973901
C546 -V601 		0.054188083171093
C546 -H554 		0.052457118794405
C565 -G595 		0.0510350348610711
A562 -V600 		0.0507564392645667
L552 -A560 		0.0468448943327984
I549 -A598 		0.0466735332561194
H554 -A605 		0.0461980594881677
A550 -P597 		0.0424489218221984
M564 -G595 		0.0423938068316563
P597 -A605 		0.0420704203497539
L552 -I603 		0.0401266530511291
F556 -V601 		0.0394751157283979
H554 -A602 		0.0387348579837308
A550 -L558 		0.036485663216181
A560 -G595 		0.035612643502092
G551 -A560 		0.0343315320571795
H554 -V599 		0.0342852925008077
L552 -P597 		0.033542868561792
C546 -A605 		0.0322677158678673
F561 -G595 		0.0312748185587601
S547 -V600 		0.0285592631520881
F557 -Y594 		0.0275415190878716
F557 -V599 		0.0272225297634459
Y594 -V600 		0.0262417981958842
L553 -V600 		0.025496313685399
S596 -I603 		0.0252256698489868
F557 -P597 		0.0231453848502796
L553 -F561 		0.0225232186195596
F557 -I603 		0.0204138205597264
G593 -V601 		0.0201142611128193
L558 -V600 		0.0197519200088845
G551 -S596 		0.0195910456818043
M564 -S596 		0.0191290096225774
H554 -A598 		0.0163910574687294
A559 -V600 		0.0160643157968536
Y555 -A602 		0.0128925567386911
S547 -F556 		0.0121111698506304
G551 -G595 		0.0104480244393735
I549 -P597 		0.00949735506833616
G551 -V601 		0.0092613908765129
L552 -G595 		0.00170873292903639
A550 -V600 		0.00125251209564858
L553 -V599 		0.000290495365993237
F557 -V600 		-0.00402996923206356
C546 -I603 		-0.00454853995357207
L552 -V600 		-0.0053734881535199
Y594 -V601 		-0.00599294418351093
I548 -A598 		-0.0082483302245655
F557 -C565 		-0.0121750743443074
A559 -V599 		-0.0154735933018983
A559 -V601 		-0.0163761303473908
Y555 -V600 		-0.0174062431933972
S547 -F557 		-0.0176139665774955
H554 -F561 		-0.0184046049446156
A560 -V600 		-0.0202642805688562
L558 -S604 		-0.0228962350165167
V600 -A605 		-0.0230590374942619
F556 -V599 		-0.0231475005111631
G551 -V599 		-0.0248529588556359
I548 -F557 		-0.0263688109164022
I549 -S604 		-0.0302659434308743
M564 -Y594 		-0.0312629046674635
I549 -L558 		-0.0333053666253367
A559 -P597 		-0.0359199435998421
G551 -F557 		-0.0359477860984327
L552 -A598 		-0.0380527631081682
Y555 -A562 		-0.039529326071623
A550 -S604 		-0.0415720809661515
I548 -P597 		-0.0436255287322798
Y555 -S596 		-0.0444541218297303
A559 -C565 		-0.0500007244305323
L552 -F557 		-0.0515298245664439
H554 -A560 		-0.05230553096301
Y555 -G593 		-0.0547963874722539
L553 -S596 		-0.0577604705128394
Y555 -G595 		-0.0601076361318205
Y555 -A605 		-0.0662089928492737
A598 -S604 		-0.0693641556649025
L552 -V601 		-0.0726265431944579
I549 -V600 		-0.0727150921275488
A562 -S596 		-0.0772898917966485
F545 -L553 		-0.0774027074412498
L553 -S604 		-0.0774432503493632
G595 -I603 		-0.0775071724038701
L553 -A598 		-0.079334404982724
L553 -I603 		-0.081907332619787
G593 -V600 		-0.0826545056053787
C546 -L553 		-0.0831286737962937
F556 -A598 		-0.0867339864920442
A550 -F557 		-0.0890460731113443
W563 -Y594 		-0.0897180226178915
I549 -F557 		-0.0897669561316499
A560 -P597 		-0.0901399917944551
M564 -G593 		-0.0945266934268316
F556 -V600 		-0.0950837657500216
F545 -L552 		-0.0977070500984114
L544 -L553 		-0.09776494429018
F561 -S596 		-0.0983985689523412
P597 -I603 		-0.0989116943418766
A562 -G595 		-0.102815843770622
I548 -F556 		-0.10439453241141
L552 -V599 		-0.104708090958218
H554 -W563 		-0.107296744635226
S547 -A598 		-0.111883748098275
I548 -V600 		-0.112167934193242
G593 -A598 		-0.112319093841842
W563 -S596 		-0.115469263999923
G595 -V601 		-0.116185922100668
G551 -L558 		-0.119627116708309
F561 -G593 		-0.120185359228422
I548 -I603 		-0.12194930492103
G593 -V599 		-0.123186101102358
F561 -V599 		-0.123954048023138
L552 -F561 		-0.125762457914123
F561 -V600 		-0.125991466558977
F557 -V601 		-0.126108931722015
F556 -I603 		-0.12853515538924
I549 -V601 		-0.129174755164348
L558 -I603 		-0.131747873774261
Y555 -W563 		-0.134884746269113
W563 -A598 		-0.134955844898623
L544 -A605 		-0.137848389326808
G551 -S604 		-0.139257406894616
S547 -H554 		-0.140940012954893
P597 -A602 		-0.144317726310378
Y555 -A560 		-0.14445393391548
L558 -V601 		-0.145285417559164
F556 -M564 		-0.147627528036719
G551 -A598 		-0.14945838790744
I548 -A605 		-0.152704221254646
F556 -G593 		-0.155491165406121
G551 -I603 		-0.156780726163788
G551 -P597 		-0.157022948399479
L553 -A562 		-0.160798023885689
Y555 -F561 		-0.163092454840335
L544 -G551 		-0.163507062842159
I548 -Y555 		-0.169861815705312
A560 -Y594 		-0.171123232218894
F545 -G551 		-0.171143171485225
L552 -S596 		-0.173990293769088
L558 -Y594 		-0.175138877213189
I548 -S604 		-0.175808790379396
F556 -Y594 		-0.179364876268718
Y555 -I603 		-0.182814277366844
L553 -Y594 		-0.183842814985912
F557 -S596 		-0.185748267300893
G551 -V600 		-0.187645136257204
L552 -A559 		-0.19769365957771
L558 -G595 		-0.198170352031733
L558 -W563 		-0.202971391366873
F556 -S596 		-0.205007453800861
I549 -Y555 		-0.205126494486301
I549 -F556 		-0.205976694354869
S547 -I603 		-0.208490646909702
H554 -V601 		-0.21177729793165
I549 -H554 		-0.212791818848665
A550 -F556 		-0.213540858389241
F545 -H554 		-0.214538655670896
C565 -Y594 		-0.217262884245713
L544 -L552 		-0.221969559309109
Y555 -P597 		-0.228065627237541
L544 -A550 		-0.228831954694254
A559 -M564 		-0.234637956333121
C546 -G551 		-0.237212158216942
Y594 -V599 		-0.23950818924371
F556 -A562 		-0.24012134736888
A598 -I603 		-0.247882887860403
S596 -V601 		-0.251011194224253
F561 -P597 		-0.254969238427314
F557 -M564 		-0.259794313662993
Y555 -V599 		-0.263806957800289
L553 -A560 		-0.270684776802256
L558 -V599 		-0.273888898195645
L558 -A598 		-0.279499719336025
C565 -P597 		-0.279981899738208
Y555 -V601 		-0.283238219289573
A562 -Y594 		-0.28924537281014
L553 -A559 		-0.298883589811437
V599 -S604 		-0.316646367899816
A550 -I603 		-0.323206009999728
S547 -L553 		-0.325424698831554
C565 -G593 		-0.341542146514678
F557 -A562 		-0.348682764358099
S547 -L552 		-0.357361828625782
F556 -W563 		-0.358269344516863
A560 -C565 		-0.368497097732646
I548 -L553 		-0.372344353110599
A559 -A598 		-0.373172820386165
A559 -G595 		-0.374795154413725
L558 -G593 		-0.384010508916393
L544 -I549 		-0.385448516022323
L553 -L558 		-0.406714034613236
F557 -W563 		-0.413755804898556
A562 -P597 		-0.416212508022627
L552 -L558 		-0.42304587191455
H554 -A559 		-0.424701171722822
F545 -A550 		-0.430749596007836
H554 -I603 		-0.441497242588015
F556 -F561 		-0.445266462670887
A562 -G593 		-0.474390690647322
A560 -G593 		-0.47880605302245
L558 -M564 		-0.482728736591782
I548 -H554 		-0.496942880830539
C546 -L552 		-0.540259598869798