[Fri Aug 26 16:45:42 2016] >Input file: TMC9JL75M1D.pdb >TM segments: 1100-1123_ 1134-1151 MAIDEN score = -8.8575 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W1136 -C1141 2.33211836801832 F1103 -S1146 0.890693286391686 F1103 -L1149 0.85434680746162 C1102 -L1150 0.695650335969783 F1103 -I1147 0.613032142649891 L1106 -Y1142 0.557076446008228 F1103 -L1145 0.55303701693438 L1106 -P1143 0.520758559426192 L1106 -S1138 0.496593176659935 C1102 -L1149 0.491294370622114 C1109 -C1139 0.47294066305004 L1137 -P1143 0.459128637090528 F1105 -S1146 0.450433393883742 C1102 -C1109 0.433817491085694 R1100 -L1149 0.433345485691344 F1103 -L1150 0.422907766936383 L1104 -S1146 0.417773298312332 C1109 -C1141 0.37720558873183 L1135 -F1140 0.348852250768623 C1109 -I1147 0.32008179332389 R1100 -I1147 0.301946998890497 L1106 -S1146 0.284442508081587 L1144 -G1151 0.2757447467344 Q1108 -Q1117 0.260923063077402 K1101 -S1148 0.233673390550007 C1109 -P1143 0.228580189156743 L1135 -P1143 0.225500075486536 Q1110 -C1139 0.2116523195385 F1103 -Q1110 0.21065194792786 L1104 -P1143 0.197138869033421 C1102 -Q1108 0.188465893512219 L1107 -P1143 0.173881191916854 F1103 -C1139 0.166903140123919 S1138 -P1143 0.159951933343058 L1113 -I1134 0.158564767021127 L1113 -C1139 0.157596499870161 C1109 -L1135 0.153442993875695 S1138 -S1148 0.153206111709608 Q1110 -F1118 0.152640146563204 C1102 -G1151 0.151011295211385 L1107 -C1141 0.150440772801733 C1109 -F1118 0.147997548086733 C1109 -S1146 0.144944731506392 L1106 -W1136 0.131930528059835 Q1110 -I1134 0.131615727386645 L1135 -L1144 0.129530357672707 I1116 -I1134 0.128873343579613 V1114 -S1138 0.12637281221688 L1111 -L1137 0.122697384683719 C1102 -S1146 0.120957741537367 F1103 -F1140 0.120343420470787 L1107 -L1149 0.119418501281599 R1100 -P1143 0.119225904635053 L1107 -L1145 0.116989483284278 L1104 -S1138 0.116012239522015 L1104 -L1111 0.115326996735127 K1101 -L1150 0.115073135310529 F1103 -Q1108 0.113703845165879 L1107 -L1135 0.10931914387612 L1104 -L1144 0.109108858604566 L1137 -I1147 0.109068492994489 L1137 -S1146 0.107907850022837 C1139 -S1148 0.106634466399074 C1109 -Q1117 0.104815652468556 L1107 -V1114 0.10335945350675 V1114 -L1135 0.102970742187993 L1106 -L1150 0.0995965472804896 K1101 -G1151 0.0982585096658328 K1101 -L1149 0.0980712201985989 I1134 -L1144 0.0919831910683064 C1141 -L1149 0.0917321646515932 L1107 -V1115 0.0907856442503059 L1113 -W1136 0.0906550570998981 L1106 -V1114 0.0861928932268592 Q1110 -L1119 0.0856043541854499 V1115 -S1120 0.0852705365621249 Q1117 -L1122 0.0839576210014501 L1113 -Y1142 0.0803358426791654 T1112 -Y1142 0.0745832176536076 C1139 -I1147 0.0744045173835914 Q1108 -L1113 0.0735922768346913 K1101 -L1145 0.0726537223537256 K1101 -I1147 0.0706187665800582 Q1108 -I1116 0.0691342508610028 F1103 -C1141 0.068201938124286 C1109 -Y1142 0.0680956637734234 T1112 -L1137 0.0656593129032739 L1111 -S1138 0.0619675840294061 Q1117 -L1135 0.0609451062357511 Q1108 -L1145 0.060780707743235 Q1108 -P1143 0.0588490890685875 L1104 -L1113 0.0543712487960306 L1106 -L1145 0.0488089529672452 Q1117 -S1138 0.0487021720219341 C1139 -L1145 0.0483867148973811 L1104 -Y1142 0.0476219575146146 R1100 -S1148 0.0465807950473318 L1107 -I1134 0.0459110526521682 C1109 -W1136 0.0436435801690993 Q1108 -S1146 0.042753466342047 F1105 -C1141 0.0399914910614552 Y1142 -L1150 0.0394165535705611 I1116 -L1135 0.038620904524155 L1104 -L1149 0.0366180733211268 L1104 -S1148 0.0350365054878057 R1100 -C1109 0.0317684099410569 Q1108 -L1137 0.0301917558532327 Q1110 -Q1117 0.0296222218481808 W1136 -P1143 0.0294056989349478 T1112 -S1138 0.0287887351849125 L1106 -S1148 0.0282163179872677 L1106 -V1115 0.0267820024927299 F1105 -C1139 0.0233437900674609 Q1108 -I1147 0.0227256885171423 C1141 -S1148 0.021874911507731 C1141 -I1147 0.0212004420646688 S1138 -S1146 0.020457137200351 C1102 -L1144 0.0195599569712501 K1101 -C1109 0.0185112861487022 W1136 -L1145 0.0159582753583543 V1115 -I1134 0.0158629769823916 F1140 -S1148 0.014374709673851 F1103 -S1138 0.014249913581049 L1104 -T1112 0.0117191205442886 Q1108 -V1115 0.0112905218705874 F1105 -S1148 0.00926949612435157 L1107 -S1138 0.00458309392256417 C1109 -F1140 0.000787476420644362 C1109 -S1138 0.000579643880177727 F1105 -L1137 9.57853533725128e-05 L1107 -T1112 -0.000645492983709417 L1135 -S1146 -0.000817125382464864 L1104 -G1151 -0.00285032590950607 C1109 -L1119 -0.00533750415390122 Y1142 -L1149 -0.00836656094412547 Q1110 -W1136 -0.00855662144524416 F1105 -L1113 -0.00904132792907131 L1107 -W1136 -0.00915013878728477 Q1108 -I1134 -0.00923534877084276 L1107 -I1147 -0.0104854474496072 Q1110 -S1146 -0.0111938923818016 I1134 -P1143 -0.0128649309357114 L1107 -I1116 -0.015805073534028 L1111 -F1118 -0.0159147976776204 S1138 -I1147 -0.0168840096371647 S1138 -L1145 -0.0187443520564905 T1112 -S1120 -0.0200823835654445 L1104 -C1141 -0.0215687398706959 Q1110 -I1116 -0.0227043578083181 L1137 -L1145 -0.0256732443574606 L1106 -L1111 -0.0270435365385189 L1106 -F1140 -0.0283874086080811 T1112 -C1121 -0.0300825590628042 C1109 -L1145 -0.0306238214096757 R1100 -L1145 -0.0337692345374849 W1136 -Y1142 -0.0344798899011902 F1140 -S1146 -0.0344933751207925 Q1110 -V1115 -0.0362027871152009 V1114 -V1123 -0.0379591166197497 V1114 -L1137 -0.0405748349436053 F1105 -G1151 -0.0428273012432339 F1103 -C1109 -0.045323101833211 Q1110 -P1143 -0.048243453833448 R1100 -S1146 -0.0503564072532745 R1100 -Q1108 -0.0510201931170851 Q1110 -S1138 -0.0513093283655721 Q1117 -L1137 -0.0562970334600297 F1118 -V1123 -0.0566042190357123 F1140 -L1145 -0.0569411353064107 L1107 -Y1142 -0.0582986314600507 R1100 -L1150 -0.0583817472306887 K1101 -S1146 -0.061758911440052 Q1108 -Y1142 -0.0620979324350897 F1105 -F1140 -0.0638876038964149 L1104 -L1145 -0.0639418616336069 P1143 -G1151 -0.0644109191551414 I1116 -S1138 -0.0669894126747161 Q1108 -L1135 -0.0681032255823162 R1100 -G1151 -0.0685280374980484 L1104 -C1139 -0.0691282576208128 C1109 -L1144 -0.0737835914709914 W1136 -L1144 -0.0741729937551154 I1116 -L1137 -0.0746901606283945 K1101 -Y1142 -0.0768691257568639 Q1110 -C1141 -0.0775886212538768 L1107 -C1139 -0.0782558264244004 V1115 -V1123 -0.0814280040562005 R1100 -Y1142 -0.0842735308774984 L1113 -C1141 -0.0864085580830392 P1143 -L1150 -0.0893108451689795 S1120 -I1134 -0.0901041399233973 F1105 -L1150 -0.0920390978743599 T1112 -L1135 -0.0923969444884136 F1105 -Y1142 -0.0928053666197077 L1135 -C1141 -0.0947544263091284 Q1108 -L1149 -0.0948473093242843 W1136 -S1146 -0.0953898266656035 P1143 -S1148 -0.0967873526811134 F1105 -I1147 -0.098260913629221 L1104 -C1109 -0.100490526737387 L1106 -I1134 -0.107014712969274 K1101 -L1106 -0.108783536311746 L1107 -L1144 -0.109723821482184 F1103 -L1137 -0.11229899898642 L1145 -G1151 -0.113149716186005 K1101 -Q1108 -0.113318717314218 F1118 -I1134 -0.116684408836968 F1103 -L1111 -0.117141086914517 F1103 -G1151 -0.117511953118397 V1114 -C1121 -0.118662823706926 F1105 -L1144 -0.120590946278619 F1140 -L1149 -0.122388288417532 T1112 -Q1117 -0.12255677037866 I1134 -F1140 -0.122815545373387 T1112 -I1134 -0.123857007045653 L1111 -I1134 -0.124756716414059 F1103 -L1144 -0.126015661299018 L1107 -F1140 -0.128625264016334 S1146 -G1151 -0.128818289313198 R1100 -L1144 -0.133405734320588 L1111 -L1119 -0.136747499009296 R1100 -F1105 -0.138163038743963 C1102 -Q1110 -0.138452135934577 K1101 -P1143 -0.138880510445555 F1103 -Y1142 -0.139327607768402 L1113 -L1122 -0.141346070332946 L1106 -L1149 -0.142017892698972 L1107 -L1150 -0.143905761941159 L1111 -Y1142 -0.147861627291626 I1134 -Y1142 -0.148957151063789 F1105 -V1114 -0.149150022692345 Q1110 -L1135 -0.149163304124097 F1105 -P1143 -0.149299286616368 L1111 -L1135 -0.151574756253724 F1105 -S1138 -0.153973494406812 Q1110 -F1140 -0.154513830140164 C1102 -P1143 -0.157882098192424 L1113 -C1121 -0.160942571914119 L1113 -L1135 -0.161867895937278 F1103 -P1143 -0.165783466106859 C1109 -L1137 -0.169424382521783 L1137 -Y1142 -0.169873099066089 L1106 -L1113 -0.173544884773301 V1115 -C1121 -0.176371216900813 Q1108 -S1138 -0.177990077840491 I1116 -V1123 -0.178237239705617 C1109 -V1114 -0.183001655310671 L1107 -S1146 -0.183256177053162 L1106 -L1144 -0.184856795596454 K1101 -L1107 -0.185576514039247 R1100 -L1107 -0.186906473419027 L1113 -L1137 -0.188585230970987 L1111 -S1120 -0.189975283252854 K1101 -Q1110 -0.190101422138397 L1104 -L1150 -0.192393706919365 F1105 -L1111 -0.195217867133563 Y1142 -I1147 -0.1964170032004 Q1108 -C1141 -0.198382957236971 V1114 -I1134 -0.199518882700363 Q1108 -C1139 -0.202240009756783 L1144 -L1150 -0.203019853641008 V1114 -L1122 -0.206360870395736 L1113 -S1120 -0.206862565252044 F1105 -T1112 -0.20912851842804 L1135 -Y1142 -0.212678610019535 I1134 -C1141 -0.214331898401223 L1106 -L1135 -0.215094977428238 T1112 -L1119 -0.219999531051056 C1109 -I1116 -0.22009346671092 L1106 -T1112 -0.225145948255657 L1107 -L1137 -0.229440402700408 F1140 -I1147 -0.230880745631952 L1104 -Q1110 -0.236155935550766 C1139 -L1144 -0.236643502460385 V1115 -L1122 -0.244261675979958 F1105 -L1149 -0.2469182647447 Q1110 -Y1142 -0.251232702492098 F1105 -L1145 -0.253912513332812 Q1117 -I1134 -0.265830736007441 Q1110 -L1137 -0.267879818706739 L1145 -L1150 -0.269986449570958 I1116 -L1122 -0.273453765596521 R1100 -L1106 -0.273536253114905 F1103 -S1148 -0.274142340572493 C1109 -I1134 -0.279905086037985 C1102 -I1147 -0.280706277735926 Y1142 -S1148 -0.286920458515239 C1141 -S1146 -0.313561627003361 Q1108 -V1114 -0.317411960004216 L1113 -S1138 -0.322492686212739 V1114 -L1119 -0.327630260561129 C1102 -Y1142 -0.329104616896284 C1102 -L1107 -0.331110161609104 L1113 -F1118 -0.332889274205455 L1104 -I1147 -0.337464724897812 S1138 -L1144 -0.342404696037322 L1111 -I1116 -0.350576166255754 L1144 -L1149 -0.351991036219667 V1114 -S1120 -0.361178165297462 L1137 -L1144 -0.363988544463931 L1111 -Q1117 -0.365392757052291 C1139 -S1146 -0.366361954341756 L1106 -I1147 -0.389656274236411 F1105 -Q1110 -0.407653880453158 I1134 -C1139 -0.411502702462139 L1113 -L1119 -0.447725548499652 L1106 -C1141 -0.454348789136612 L1106 -L1137 -0.45477524815053 P1143 -L1149 -0.455500515829304 C1102 -S1148 -0.455603913421196 T1112 -F1118 -0.46443557813378 Q1117 -V1123 -0.464767086053879 L1107 -L1113 -0.466506711656599 L1106 -C1139 -0.504618017708798 C1109 -V1115 -0.522372056770314 I1116 -C1121 -0.536591331652312 C1102 -L1145 -0.546187211869769