[Mon Aug 29 18:08:23 2016] >Input file: TMD8IQE9M4G.pdb >TM segments: 174-191 MAIDEN score = -2.2179 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I180 -F186 1.17911153103083 I180 -N187 0.534117531730885 I180 -R185 0.342753736602801 R185 -A190 0.272755301585959 L177 -P188 0.215176858829048 A181 -N187 0.18718412165792 A181 -F186 0.16812027065914 I180 -E191 0.142589393806377 S184 -E191 0.130985937822986 V179 -S184 0.12964978076475 A181 -A190 0.129079790775856 S178 -E183 0.120143277256343 I176 -S184 0.111292721301471 V179 -R185 0.0868528273382472 E183 -A190 0.0824653099522696 L177 -E183 0.0714867469125373 F186 -E191 0.0666896187743435 L175 -F186 0.0662427949187463 I182 -A190 0.0656290475354733 I176 -R185 0.0582384696462336 S178 -S184 0.057574548536752 I182 -E191 0.0379282231341653 E183 -P188 0.0376559314611287 E183 -F189 0.02998212062982 S178 -N187 0.0191485432142062 S178 -F186 0.0148807040837735 S178 -P188 0.0141155458631648 V179 -P188 0.0109180373311079 V179 -A190 0.0096738639344025 V179 -N187 -0.00344540276016625 L174 -F186 -0.0110873541153573 I182 -P188 -0.0142985465449485 R185 -E191 -0.0205737959509003 I182 -F189 -0.0425913812503964 I180 -P188 -0.0456013347604833 I176 -F186 -0.0585558707162255 L174 -R185 -0.0604705543180306 L177 -N187 -0.0672885539603944 L175 -E183 -0.069459722671533 S184 -F189 -0.0738026293572442 V179 -F186 -0.0748053918759659 A181 -E191 -0.0816428872652759 A181 -F189 -0.101441352966354 S178 -R185 -0.102342804673347 I180 -F189 -0.107306827504147 L175 -S184 -0.111813399245428 A181 -P188 -0.117503540692664 I176 -P188 -0.122657198289032 I176 -N187 -0.131926650565269 L174 -I182 -0.136206133082001 L174 -E183 -0.137003575621502 L175 -R185 -0.163192605507084 E183 -E191 -0.167309312619055 L175 -I182 -0.193619453672951 I176 -E183 -0.193788406555347 L174 -A181 -0.195720137065026 L177 -S184 -0.220222457964056 L175 -A181 -0.226420015088983 L174 -V179 -0.227649027216913 I180 -A190 -0.237925763925403 L177 -R185 -0.276088797056313 I182 -N187 -0.303187446031063 S184 -A190 -0.321376560952714 L177 -F186 -0.331812966426007 L177 -I182 -0.33285156863464 L175 -I180 -0.374296831057495 I176 -I182 -0.378426109668359 L174 -I180 -0.381166782704414 I176 -A181 -0.393445378383291