[Mon Aug 29 18:12:49 2016] >Input file: TMD9VTU1M1G.pdb >TM segments: 315-328 MAIDEN score = -2.3041 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A317 -A324 0.364861049553749 D315 -P321 0.167498372912531 A320 -N328 0.133145647560618 Q316 -S325 0.116448971377036 A317 -S325 0.104087078519138 Q316 -P321 0.101282870005582 A318 -S325 0.0922476761123914 L323 -N328 0.0718098481005427 A318 -A326 0.0509755214852854 A318 -V327 0.023932887404519 Q316 -L323 -0.00788542886260558 D315 -T322 -0.0272115879652404 G319 -A326 -0.0333973923039332 Q316 -A324 -0.0471539922142852 T322 -N328 -0.058543688026206 G319 -N328 -0.0649062197736914 A317 -T322 -0.0897883237516375 A320 -S325 -0.0943606503585874 P321 -V327 -0.0997946565335504 G319 -S325 -0.110095202636227 D315 -L323 -0.120279774433045 A320 -V327 -0.12770487322519 A318 -L323 -0.127967584041675 D315 -A324 -0.153061628743139 G319 -V327 -0.15315725044612 Q316 -T322 -0.170836042457515 D315 -A320 -0.188356111758646 A318 -A324 -0.189454959144288 A320 -A326 -0.205567811360852 P321 -A326 -0.223574913573902 T322 -V327 -0.236013009608265 A317 -L323 -0.273026179029008 P321 -N328 -0.339294394380464 G319 -A324 -0.388991110191286