[Fri Aug 26 17:35:54 2016] >Input file: TMF7X6G5M1D.pdb >TM segments: 384-401 MAIDEN score = -2.8402 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C393 -E398 0.872312503914348 V389 -R394 0.467610416884964 H390 -N395 0.355877961546991 R387 -N395 0.246397333947761 R387 -C393 0.214767624829227 Q384 -H390 0.17287103830499 H390 -A399 0.122950208259018 R387 -R394 0.109929257101351 V388 -A396 0.109925034669137 V388 -N395 0.0887777444815289 H390 -A401 0.0881195879366539 R387 -I392 0.0862908799611897 Q384 -N391 0.0800413724246449 C393 -A399 0.07822836172709 Q384 -I392 0.0682511546040824 N391 -A401 0.0571909257495857 H390 -E398 0.0345033267134731 L385 -C393 0.0341919144892628 F386 -R394 0.0148041747185489 V389 -E398 0.00172380565711672 N391 -A399 -8.10904189223471e-05 I392 -A399 -0.0105160059488836 I392 -A401 -0.0126554613647163 Q384 -V389 -0.0133626607549484 F386 -N391 -0.0177092321314642 H390 -A396 -0.0226083659097993 V388 -V397 -0.0280316079728555 R394 -A399 -0.0342881418730288 C393 -A401 -0.0435959400028456 I392 -E398 -0.0580339127158482 I392 -L400 -0.0614874549450359 N391 -L400 -0.0639745484620739 V388 -E398 -0.0709226516275261 V389 -V397 -0.0710545508423044 L385 -R394 -0.0863447319381709 R387 -V397 -0.110528052544336 C393 -L400 -0.13338864588036 N395 -L400 -0.134424532922265 L385 -I392 -0.135070546629347 R394 -L400 -0.144136940162657 R387 -A396 -0.152788197839301 V389 -A396 -0.159577415027376 R394 -A401 -0.161262720073529 V388 -R394 -0.167239331036775 F386 -N395 -0.171331222765062 N395 -A401 -0.181679245466049 Q384 -C393 -0.202752004735984 N391 -A396 -0.208014848562178 F386 -I392 -0.222869821376899 N391 -E398 -0.228199886455126 L385 -N391 -0.237468127027051 A396 -A401 -0.240325459100301 L385 -H390 -0.297392502494936 V388 -C393 -0.302890253490127 N391 -V397 -0.326300684694894 V389 -N395 -0.327265461163613 H390 -V397 -0.332163297734508 I392 -V397 -0.45007619844956 F386 -C393 -0.523197586991024