[Mon Aug 29 16:50:19 2016] >Input file: TMF8WDH1M1G.pdb >TM segments: 18-49 MAIDEN score = -9.5483 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W39 -A44 0.495600826544091 W18 -N23 0.383158657338389 F35 -I40 0.360510563085606 S27 -I32 0.354068599452388 G31 -W39 0.260854547291076 E20 -V25 0.207653810419657 R21 -V28 0.199658577883193 F34 -W39 0.199454721487951 N23 -G31 0.193189878691305 W39 -P49 0.190120024408102 I40 -V47 0.180541067339869 D43 -P49 0.156060515774563 A24 -G31 0.154521250620867 R22 -V29 0.151595830102 A30 -G37 0.151226403237787 A24 -L33 0.113203466138551 V28 -T36 0.108745554650131 A30 -W38 0.108607942136858 G37 -A45 0.10617772180684 W38 -A45 0.105216915798398 T36 -V46 0.103594163382334 T36 -A44 0.102107453916234 W39 -Y48 0.0961060874447073 T36 -Y48 0.0840412878665795 V25 -L33 0.0833203980032176 S27 -T36 0.0809432032554407 F35 -A44 0.0669652582280236 F34 -D43 0.0652265341092351 I40 -P49 0.0574916988527261 M41 -P49 0.0458686881906614 R21 -S27 0.0449223126005378 R21 -V29 0.0429241532784284 E20 -V28 0.0269147186183307 F35 -D43 0.0241737301925218 W18 -V25 0.0212809993213812 V29 -G37 0.017644716119781 G31 -I40 0.0106492362874739 W18 -S27 0.00658488956847991 L33 -I42 0.00571204678034576 N23 -A30 0.00462052954694059 I42 -P49 -0.00153064315350937 S19 -A24 -0.0126000794926719 W18 -A26 -0.0139810228565012 I40 -A45 -0.0249150965524372 W38 -Y48 -0.0301971840421006 T36 -A45 -0.0324519204872991 M41 -V46 -0.0336774310204255 G37 -D43 -0.0360073645999117 T36 -M41 -0.0364323017224382 V25 -A30 -0.0408148072535317 S19 -V28 -0.0484103956234034 R22 -A30 -0.0484784959388351 M41 -V47 -0.0580938723161397 S27 -F35 -0.0588798314737374 N23 -V28 -0.0603494984311224 A24 -I32 -0.0612926593452707 A26 -L33 -0.0627096611690696 E20 -S27 -0.069998529028328 M41 -Y48 -0.0721988698860487 L33 -M41 -0.0723175060323005 G37 -A44 -0.0742667622639574 F34 -I42 -0.0751865900811688 W38 -V46 -0.0791951818141468 S19 -S27 -0.0808434774068066 G37 -V46 -0.0847076961304323 I40 -V46 -0.0857520252109119 R22 -S27 -0.0895639225342538 A26 -F34 -0.0913798557688041 V28 -G37 -0.0983461730073181 E20 -A26 -0.101513349043306 F34 -M41 -0.102129375508916 G31 -G37 -0.106836641012062 G37 -Y48 -0.109054991189238 V25 -G31 -0.112184081592253 S27 -F34 -0.117511862336552 F34 -I40 -0.120365556170773 W39 -A45 -0.127199002308101 T36 -D43 -0.129439921152352 N23 -I32 -0.130258758055008 W39 -V47 -0.131084598941296 G31 -T36 -0.131663817484553 W38 -A44 -0.13526148236159 A30 -W39 -0.136215741940665 W38 -D43 -0.136320258537047 L33 -D43 -0.137174605859709 A44 -P49 -0.137423446316262 A26 -I32 -0.138849096063238 V28 -W38 -0.141861134476395 R22 -V28 -0.145814450106009 R21 -A26 -0.145966009010018 V29 -T36 -0.146128878495025 L33 -W38 -0.146980632176584 V25 -F34 -0.149152978798618 D43 -Y48 -0.163100083098326 S19 -A26 -0.165030259964295 W18 -A24 -0.169952609574117 I32 -M41 -0.171883360920576 A24 -A30 -0.175029224621056 I42 -Y48 -0.175677010649516 A26 -F35 -0.178354912554504 V29 -W38 -0.1784152268075 E20 -V29 -0.190806378527785 V25 -I32 -0.199359701903045 I40 -Y48 -0.201290237194278 F35 -I42 -0.201832754300275 G37 -I42 -0.204484152717285 A30 -T36 -0.207842395656749 I32 -I40 -0.220296527527031 I32 -G37 -0.225856703641754 S27 -L33 -0.229210347318635 L33 -W39 -0.258801009387704 L33 -I40 -0.260840614999685 T36 -P49 -0.262279399132324 G31 -W38 -0.283295967997389 I42 -V47 -0.292044192230311 A30 -F35 -0.295156972971936 V28 -F35 -0.304122676882084 N23 -V29 -0.32704597875488 V29 -F34 -0.328087540808533 I32 -W39 -0.331312221945778 F35 -M41 -0.332466220736706 V29 -F35 -0.33667312034304 I32 -W38 -0.343467773870122 T36 -I42 -0.351941530025799 S19 -V25 -0.362752127623546 V28 -F34 -0.375483133054975 W39 -V46 -0.385779162560909 A24 -V29 -0.399214002894742 V28 -L33 -0.437090109784858 A26 -G31 -0.442312961081264