[Mon Aug 29 16:54:14 2016] >Input file: TMF9Y7E5M2G.pdb >TM segments: 253-296 MAIDEN score = -2.6060 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L259 -L280 0.904354104589454 V258 -V283 0.731610705941675 L259 -L279 0.722160538048344 V258 -L280 0.67340062136338 L259 -R281 0.6199960452642 V258 -E282 0.474188965251983 L256 -E282 0.430391598215863 V286 -V295 0.409203656244548 A290 -V295 0.401555308674757 I268 -L274 0.351533792433834 Y260 -V285 0.340326601903826 V255 -R281 0.333486443972193 D263 -V283 0.332354412465136 V264 -D275 0.331205250524913 V258 -L279 0.306143614570148 V255 -Y287 0.271363909766294 L259 -V264 0.271100832313429 L256 -L280 0.268279990521286 V255 -V285 0.264230432189151 V255 -E282 0.245011147516831 D263 -D275 0.235446913139651 A270 -R277 0.230301539996039 V285 -D291 0.229161677938722 L256 -P284 0.226592055414918 P273 -L279 0.220833666656354 V286 -I296 0.214477486758827 L259 -P284 0.212061999479858 D263 -R281 0.201750224506108 T262 -A270 0.187255810290597 A267 -A278 0.17320326583862 E254 -V285 0.163488658158504 V264 -R277 0.161625871423525 G257 -A278 0.156570458174465 Y260 -E282 0.155802676709825 D253 -R281 0.153533391544633 V283 -V295 0.141617873997081 G257 -L279 0.13580548853204 L256 -V283 0.135464134505883 A267 -D275 0.134091688824735 S266 -A278 0.124891682016846 I268 -L279 0.122476810183866 A270 -A278 0.119824824848618 L259 -L274 0.11687732694474 V261 -S266 0.113920775204496 V285 -S294 0.112619463045816 Y287 -I296 0.10781830950324 L259 -E282 0.10692822631321 I265 -L280 0.0965133414025159 T262 -E282 0.0964663973269291 E288 -S294 0.0954843505364048 D263 -L274 0.0915915755143324 D263 -E282 0.0913415817448051 V258 -A278 0.0910690386792983 D253 -V258 0.08322288199345 L259 -A270 0.0823435453152062 L259 -S266 0.0810213731239706 V264 -V283 0.0807044124975169 E254 -P284 0.0788568280695365 D263 -A270 0.0755765761874709 V264 -L276 0.0746152453182202 S266 -D275 0.0709025753508783 S266 -L274 0.0706480524567996 D263 -L280 0.0705482569058606 I268 -L280 0.0690526311202184 A267 -L276 0.0656253350579954 S266 -L280 0.0652565352576975 L274 -L280 0.0648052516020923 G257 -V286 0.0637352180795743 V261 -A270 0.0611629769791744 A267 -L279 0.0608979652784889 V264 -Q272 0.0606311138230286 V285 -I296 0.0602434600962667 L259 -I268 0.0602014321133049 V255 -V283 0.0574113461738825 V258 -V286 0.0547246694889569 I268 -D275 0.0521484540118857 P284 -V295 0.0519357138878584 V255 -A278 0.0489337798573795 T262 -A269 0.0477413521790311 V264 -R281 0.0468345137469166 Y287 -I293 0.0448490942948139 A270 -L280 0.0434385398834154 I265 -P273 0.0417867521077684 D291 -I296 0.041129617330129 A270 -L276 0.0403470741739063 E288 -I293 0.0401834870450783 D263 -P284 0.0391020083369336 L256 -A278 0.0385750715892632 G271 -L280 0.0288774004931174 V258 -V285 0.028660050539731 I268 -L276 0.0286148424283912 Y260 -A278 0.026800607564279 D263 -I268 0.0262729310436832 I265 -Q272 0.0251626082800285 V261 -L274 0.0247208978775939 G271 -A278 0.0238971016945841 L259 -L276 0.0238301817052076 G271 -L279 0.0225567192115488 V261 -A269 0.022224433324225 A270 -D275 0.0209424554809199 T262 -G271 0.0190715362695482 P273 -L280 0.0181654342172397 E254 -V283 0.0171384161731052 A267 -Q272 0.0140242487253071 V286 -I293 0.0120798328585003 A267 -R281 0.0117057691550286 T262 -L280 0.00941822387733016 I265 -L279 0.00566940760519152 G257 -D263 0.0053732038244923 G257 -T262 0.00488422660889754 L259 -V285 0.00310735798920447 L256 -L279 -0.000186403708851923 P284 -I296 -0.000798611791249293 V258 -A267 -0.00585892866293403 T262 -R281 -0.00781823400927451 P284 -A290 -0.00826092204520146 T262 -V283 -0.00953545533784367 E254 -V286 -0.00984009171273437 G257 -V264 -0.00996795093965908 V261 -A278 -0.0100520204645678 V285 -A292 -0.0110257851061637 A267 -L274 -0.012798974060626 S289 -S294 -0.0139463194512706 E254 -R281 -0.0156735401783736 L259 -R277 -0.0157883003902821 V264 -A278 -0.0169449263782919 Y260 -R277 -0.0262106014942076 E288 -I296 -0.0267167558087964 I268 -R277 -0.0296550643584239 L256 -V285 -0.0306625017726088 V261 -V283 -0.0349352643978611 Y260 -I268 -0.0360191291041412 D263 -P273 -0.0380505526118431 T262 -L279 -0.0381360971443785 G257 -P284 -0.0415172142191134 Y260 -A269 -0.0423932075114193 S266 -Q272 -0.0427345702547477 S266 -R277 -0.0455802061705249 D263 -G271 -0.0530999282768745 G257 -V285 -0.0535204450239455 V264 -E282 -0.0549885872993978 Q272 -A278 -0.0554398484974132 V258 -V264 -0.0558645368781301 Q272 -L279 -0.0562970334600297 D263 -A269 -0.0571174634725962 V264 -P273 -0.0593598145535315 Y260 -L279 -0.0597936590298063 G271 -R277 -0.0611631533606563 S266 -L279 -0.0625272525630427 D263 -A278 -0.0631299851085263 G271 -L276 -0.0677422525819029 D275 -L280 -0.0687451842679012 V264 -A269 -0.0716162613104681 Y287 -A292 -0.0727393885674724 E254 -L280 -0.0728682127962058 V255 -Y260 -0.0741029972107401 V255 -V286 -0.0759389627438809 Y260 -S266 -0.0765594471269742 E254 -E282 -0.0771439705125481 S266 -P273 -0.0775159302752817 Y260 -A270 -0.0791800655731423 Y260 -A267 -0.0851929893762262 L259 -D275 -0.0855373665347315 V258 -R277 -0.0857544161275587 Y260 -R281 -0.0862775511925729 I265 -D275 -0.0875380567548099 D263 -Q272 -0.0892141135037936 A269 -L274 -0.0941340832598003 V255 -E288 -0.0958847154628493 E254 -Y287 -0.0973559225054497 A267 -E282 -0.0984719781097794 D263 -R277 -0.0989727437152423 T262 -P284 -0.099441011867178 S289 -I296 -0.0995203625175658 I268 -A278 -0.0995567216212168 I268 -P273 -0.101469806070178 L256 -V286 -0.10411814972593 V261 -D275 -0.104857216199852 V258 -S266 -0.105213968071242 T262 -L274 -0.107441145399748 V258 -I265 -0.109895110725236 Y260 -D275 -0.110279270754596 P273 -A278 -0.110969453600835 L280 -V285 -0.111081494865721 S266 -R281 -0.111884034676514 V264 -G271 -0.111896144336427 V258 -D263 -0.112635031979967 V255 -L279 -0.116297322411982 Y260 -P284 -0.119726742378289 L259 -I265 -0.122119765503342 S266 -G271 -0.130161702708108 Y260 -L274 -0.134320016402336 Q272 -R277 -0.137625594297939 A270 -L279 -0.14561685298921 A267 -P273 -0.145869843363023 V261 -A267 -0.147531158389051 V285 -A290 -0.148069542440888 P284 -S294 -0.150495494917525 V286 -A292 -0.158694827013725 E254 -L279 -0.160961766019801 A269 -D275 -0.161877977365648 G257 -R277 -0.171269088181905 G257 -R281 -0.17242686791064 V258 -R281 -0.175278471831176 Y260 -L280 -0.176868399668825 A269 -R277 -0.178396611852036 V261 -I268 -0.178529228810128 I265 -R277 -0.183391136947048 L274 -L279 -0.191732755200942 I265 -L274 -0.192683194881906 Y287 -V295 -0.195222131963638 D253 -V285 -0.19587694519004 V264 -L274 -0.197366910931009 I265 -A270 -0.200608980700343 A267 -R277 -0.200754678308988 V261 -R277 -0.200915416724229 L259 -A267 -0.207667547311726 V255 -P284 -0.220171475353553 G257 -L280 -0.221724034892062 V264 -L279 -0.222883685708958 I265 -G271 -0.224907706681599 L259 -A278 -0.225199621117076 V261 -L280 -0.228024223163164 V264 -A270 -0.228872884755571 V264 -L280 -0.229325259201499 Y260 -I265 -0.23046550072961 V261 -L279 -0.234197419691748 A290 -I296 -0.24721570130101 S289 -V295 -0.25059841975835 D253 -E282 -0.266233067087785 A267 -L280 -0.274306591330845 V261 -R281 -0.274874979333242 D263 -L279 -0.276183833630003 V258 -P284 -0.283279581668498 V255 -L280 -0.295730545581632 V286 -D291 -0.297150732514655 Y287 -S294 -0.298713776054518 E288 -V295 -0.338900443899127 V285 -V295 -0.340366872099981 Y260 -V283 -0.346053232855127 V286 -S294 -0.35888933739075 T262 -A267 -0.37556479088123 T262 -I268 -0.401831751269523 G257 -E282 -0.446369803946361 G257 -V283 -0.45722324493069 L259 -V283 -0.464690139249441 L256 -R281 -0.506694800037375