[Mon Aug 29 17:24:12 2016] >Input file: TMG3HGS4M1G.pdb >TM segments: 534-547 MAIDEN score = -3.6776 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A542 -P547 0.344436987101134 E536 -Q544 0.330494137686578 L541 -Q546 0.239656131749063 E534 -A542 0.184926880892818 L539 -P547 0.183761682619995 L539 -Q544 0.124922374792802 A535 -V543 0.0932818807899505 E537 -A542 0.0658954151663051 E537 -Q544 0.052238542875831 L538 -Q546 0.0202099132291496 L538 -P547 0.0146753984280057 E537 -I545 0.012189781376061 E534 -S540 0.00687093857790769 E537 -Q546 -0.0299944314016708 E534 -L539 -0.0476002797429347 S540 -Q546 -0.0494037660561666 A535 -Q544 -0.100988994307421 E536 -L541 -0.123319856885342 E534 -V543 -0.131027243246217 E536 -I545 -0.134549245305132 E536 -A542 -0.135522847330204 E534 -L541 -0.137489444396498 A535 -A542 -0.156116218248584 S540 -I545 -0.165902234375015 E536 -V543 -0.188288539182177 L539 -Q546 -0.229532013877991 A535 -L541 -0.230163254970799 L538 -I545 -0.256016327014667 E537 -V543 -0.311775337713951 S540 -P547 -0.318029599670115 E537 -P547 -0.321935973456726 L539 -I545 -0.381300227151132 L541 -P547 -0.447269605961821 L538 -V543 -0.46553207534514 A535 -S540 -0.481079945241007 L538 -Q544 -0.508333649375507