[Fri Aug 26 18:03:24 2016] >Input file: TMG9KUD7M1D.pdb >TM segments: 39-58_ 60-81 MAIDEN score = 4.8319 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A57 -V62 1.50154154749978 K69 -A76 1.07765074195122 T67 -Y79 0.978948738423918 I68 -R80 0.762841447249045 V62 -T67 0.684731838186167 I68 -Y79 0.668057104590885 L70 -Y79 0.637297109987696 A57 -R63 0.575450405934424 A50 -V62 0.525010840898849 K47 -K69 0.469673899621909 I56 -G61 0.452837787718989 K72 -N78 0.406458584826665 P42 -K72 0.379492328719841 Y65 -G81 0.357202022982407 V62 -Y77 0.357179487350652 K72 -Y77 0.328963321494788 L71 -A76 0.323343938560132 M48 -Y53 0.321960842523197 G64 -Y79 0.309264272812795 L71 -Y77 0.303350136747916 A50 -K69 0.290538420251635 M48 -R63 0.288502166129793 K47 -P66 0.280971208022377 G61 -N78 0.277537149939883 M48 -I56 0.261676218682947 Y53 -S58 0.258577020307264 F60 -Y79 0.234846809200126 I39 -K44 0.222920109104095 R63 -K69 0.206949946045422 K69 -D74 0.205466154465138 Y65 -N78 0.198766842608819 V45 -L70 0.196599439940718 D49 -K69 0.192727995800357 Y53 -Y65 0.185817404474957 S58 -N78 0.184460236480497 M48 -G64 0.180188463576483 G64 -N78 0.178638743702236 V45 -Y79 0.17740741281256 T67 -A76 0.172376848341241 A50 -R63 0.171662144932588 G61 -Y77 0.171308979797706 S58 -P66 0.161694761256921 S52 -Y65 0.152917708994123 R63 -N78 0.151644264547136 Y53 -P66 0.146391297019381 M48 -G61 0.145363861252537 I68 -G81 0.143585236107728 M48 -N78 0.138666695731282 K47 -I56 0.135201883383957 G61 -K69 0.135125247280595 A57 -N78 0.132581673083212 P66 -G81 0.13220122710157 T51 -G61 0.132177506829272 K69 -G81 0.13057183366772 K47 -V62 0.129849223184667 V45 -K72 0.126751787300885 L70 -N78 0.12381808828298 K47 -I68 0.12359078014265 S58 -K69 0.122548693077039 I56 -Y65 0.11715928303741 S58 -A76 0.116233038235061 S58 -T67 0.116216093112581 G61 -A76 0.115880840046244 D49 -R63 0.115642173636284 S52 -V62 0.115046602792718 S54 -V62 0.113700404738858 V43 -G73 0.113476896371692 A50 -Y65 0.110015143265116 I56 -I68 0.101439454452953 T51 -G64 0.101382352075851 I39 -V45 0.0990416765850792 S58 -G64 0.0989017592332502 P66 -Y77 0.0982524788901706 G64 -K69 0.092079919275913 G46 -L71 0.0908944091493984 T51 -S58 0.0907190980941959 G46 -T67 0.0880787156408252 S58 -Y65 0.0857096146293657 V45 -L71 0.0807461006726715 S52 -P66 0.0778518268067394 D49 -F60 0.0776743439464944 S54 -T67 0.0766974521904369 V62 -L70 0.0756095904951606 V43 -K69 0.075094399828342 G46 -Y53 0.0750415506361577 A50 -I56 0.0738898569215678 S41 -G46 0.0724467831971674 I56 -V62 0.0713868638368442 G46 -A57 0.0670500436512662 D49 -Y65 0.0663596516889546 D49 -S58 0.0655479897079716 A50 -F60 0.0621867252595152 P42 -G73 0.0617458664843169 D49 -S55 0.0613404096740731 V45 -A76 0.0603357685248982 A57 -A76 0.0595911476564268 G46 -N78 0.058542298736238 A57 -L70 0.0577795546793047 S54 -R63 0.0548762887716001 T67 -R80 0.0546655622661429 F60 -P66 0.0503245792687674 L71 -N78 0.0492894278089477 M48 -F60 0.0491715236155381 F60 -Y65 0.0485317265577887 L70 -A76 0.0468155853562782 V62 -R80 0.044286649800533 K44 -I68 0.0440410909994369 S52 -S58 0.0436841351859454 I56 -A76 0.0395296120173914 K47 -S54 0.0368597943126328 Y53 -G64 0.0368568939215734 V43 -I68 0.035765814449622 K72 -Y79 0.0315089370576809 R63 -R80 0.0302421981107073 V62 -Y79 0.0293617729712299 L70 -G81 0.0291522913964304 P42 -L70 0.0282035002430909 D49 -A57 0.0271792760466552 G64 -G81 0.0235340613449195 V62 -N78 0.0229530623571907 K47 -S52 0.0220675026996178 I56 -L70 0.0216026703714638 I56 -L75 0.0215011307813802 V45 -T67 0.0213876657869743 V62 -L71 0.0174284606778605 Y53 -T67 0.0168917557285622 I68 -N78 0.0160094523264096 A50 -I68 0.0144597529245631 T51 -T67 0.0141527229689196 G61 -L75 0.0120847235758732 I68 -L75 0.00719411978149509 S52 -G64 0.00678347732691353 M48 -L70 0.00608048466556355 T67 -G81 0.00605144824579251 G64 -R80 0.00481399864926124 D49 -G64 0.00445171594840044 A57 -I68 0.0031333575397503 Y65 -R80 0.00302275653326189 I68 -A76 0.00159947543379779 Y53 -K69 0.000758689181982852 R63 -Y79 0.000162534361466293 G61 -I68 -0.000706585607875621 L70 -L75 -0.00128793551446327 G46 -Y79 -0.00163731811085199 T51 -F60 -0.00491196323834231 S41 -K72 -0.00558276672627755 S41 -L71 -0.00604495503594094 K47 -A57 -0.00831165206204076 S54 -G64 -0.00905341325694353 S52 -G61 -0.00916197072297131 F60 -K69 -0.010221934531689 S52 -F60 -0.0115617118608877 R63 -I68 -0.0118954751518308 F60 -I68 -0.0123472812494976 V45 -Y77 -0.0133324485512414 I56 -T67 -0.0193686594554059 D49 -G61 -0.0195946489144564 M48 -A57 -0.0199164951471063 P66 -N78 -0.0224604819420851 I56 -G64 -0.024601996844952 S41 -L70 -0.0248499268118207 V62 -A76 -0.0250472722988579 V43 -A76 -0.0258672713808945 S52 -T67 -0.0263610936851246 T67 -N78 -0.0268492602099188 K47 -Y79 -0.0282872789736377 I56 -R63 -0.0297276614604831 A57 -Y77 -0.0313984049612721 A57 -Y65 -0.0333388580658629 A57 -P66 -0.0346226389824471 Y53 -F60 -0.0362121561641171 T67 -Y77 -0.0380089195913477 G46 -I56 -0.0403675025321597 A50 -S55 -0.0409403081483832 S58 -R63 -0.0434159810057615 K69 -Y79 -0.0435739749221442 K44 -Y79 -0.0444256062840456 G46 -S52 -0.0472723962978193 V43 -Y77 -0.0480284109877234 I56 -K69 -0.0486405513247155 T51 -R63 -0.0520945607147465 G61 -P66 -0.0521823060838194 I39 -G46 -0.0533265848448199 G46 -K69 -0.0569103558037152 S52 -A57 -0.0583540825746116 I56 -L71 -0.060015097576648 K47 -S55 -0.0605302925802826 S55 -R63 -0.0608656066978703 G46 -P66 -0.0623695349695712 F60 -L75 -0.0629107758144318 M48 -S55 -0.0635636842789542 V45 -N78 -0.0661316960943172 S52 -R63 -0.0674002096817601 V45 -P66 -0.0677807581895047 I56 -Y77 -0.0690292343266921 F60 -N78 -0.0716205676658041 F60 -D74 -0.0716567950872244 F60 -R80 -0.0737996887374646 A57 -G64 -0.0752112979973757 Y65 -L70 -0.0768277408766993 P42 -L71 -0.0768819939463246 V43 -Y79 -0.0770192541514256 S58 -I68 -0.0772710843211595 K47 -L71 -0.0853785668363978 Y53 -I68 -0.0856632878700236 A50 -P66 -0.0888578822718255 S54 -F60 -0.0903813921110057 I56 -P66 -0.0912875648565921 K47 -Y65 -0.0919454302847349 L71 -Y79 -0.093488041499489 A50 -A57 -0.0945491158249432 M48 -L71 -0.096581094695061 G61 -Y79 -0.0970690278207718 A50 -T67 -0.0973025359796882 G61 -L70 -0.103711279348317 D49 -I56 -0.107441938327142 G46 -Y65 -0.107681333615081 D49 -S54 -0.108351483444444 G46 -K72 -0.112579992539224 K47 -N78 -0.116189534103902 Y53 -G61 -0.116659180167229 A50 -S58 -0.117483785215752 M48 -Y65 -0.118116272878087 G40 -V45 -0.118728415333287 F60 -Y77 -0.120007476796101 T51 -Y65 -0.121113158634277 S55 -F60 -0.12147852839838 G61 -T67 -0.123570855453902 K47 -G64 -0.124945244570998 S55 -G61 -0.128039158731611 I68 -Y77 -0.130337040832366 M48 -T67 -0.132560999621408 S54 -G61 -0.133172994123415 I56 -N78 -0.133863909504488 M48 -S58 -0.136894503623851 T51 -I56 -0.137370089185967 K47 -L70 -0.137733855346455 S54 -Y65 -0.137836345260791 K69 -R80 -0.138840175513879 K44 -G73 -0.140825843303015 M48 -P66 -0.143679523573192 A57 -L71 -0.143926992516727 F60 -L70 -0.144544710567378 Y53 -R63 -0.149432371920376 K44 -A76 -0.150260611607568 L70 -Y77 -0.150987128226662 M48 -S54 -0.151031617123838 P66 -Y79 -0.152221361907994 D49 -I68 -0.153619677575267 G46 -L70 -0.159318550666596 V62 -I68 -0.160519685928371 L71 -R80 -0.163020503222371 V43 -L71 -0.163760934747166 F60 -L71 -0.163934386297153 K44 -K69 -0.170102889762858 M48 -K69 -0.170825728544944 A50 -G64 -0.171857900086072 K69 -L75 -0.171909105024222 K47 -Y53 -0.17520649572172 V62 -K69 -0.175381846848975 K44 -L70 -0.175392709331838 L70 -R80 -0.180536317189001 K44 -L71 -0.183938934965248 K44 -K72 -0.193206714341098 M48 -V62 -0.196905588000706 T51 -V62 -0.214161828821793 A57 -T67 -0.214733730401606 G46 -I68 -0.215910780514877 D49 -T67 -0.217530838593869 T51 -P66 -0.220506401187056 G73 -N78 -0.221026771061853 V43 -K72 -0.222823451566892 V45 -K69 -0.225393032781508 K47 -T67 -0.231772310910789 D49 -V62 -0.233228024779474 F60 -T67 -0.239330467824036 T51 -A57 -0.248184573207369 S55 -V62 -0.257175196326672 A50 -G61 -0.267039428416668 V43 -L70 -0.283082103223846 F60 -A76 -0.2836269683984 A57 -K69 -0.28801782494771 K69 -N78 -0.323022585293292 K69 -Y77 -0.328384777508663 Y53 -V62 -0.374812651951704 M48 -I68 -0.388765266534437 D49 -P66 -0.394286685400757 Y65 -Y79 -0.404617664442026 V45 -I68 -0.46548874605957 P66 -R80 -0.467787443865496