[Mon Aug 29 18:00:53 2016] >Input file: TMJ3KTQ7M1G.pdb >TM segments: 89-113 MAIDEN score = -2.2400 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K99 -K105 0.440434859267455 K96 -K103 0.347433353042136 E93 -K99 0.33858867843688 Q97 -K105 0.329684574595248 R89 -V94 0.309928113559667 K96 -E102 0.254238180639348 K104 -E110 0.239806961607369 K100 -E106 0.194609431331235 R89 -E95 0.178690944147459 E95 -K103 0.17725851113663 K103 -S111 0.171043196913243 L101 -E106 0.15771840749567 L101 -T107 0.148545631994278 K100 -I108 0.13121736567227 L101 -T109 0.13078669964213 E93 -K100 0.128676219536366 K99 -T107 0.127433527119911 K103 -I108 0.122199322985159 E106 -G113 0.119308506283917 K96 -L101 0.117505276448959 E93 -E102 0.112756412137612 E102 -E110 0.0969326392425658 K105 -G113 0.0899098049550183 E106 -S111 0.0861882075105393 V94 -L101 0.0806534026525698 A92 -Q97 0.0769433071191878 A92 -L101 0.0705250280984764 K103 -E110 0.0576922088693763 T107 -G113 0.0479557700514377 K100 -T109 0.0393448098457573 E106 -A112 0.0384550315501038 L101 -E110 0.0358193537764686 L90 -S98 0.029570143025901 S98 -K105 0.0261045558069839 V94 -E102 0.0251389506475455 E93 -L101 0.0241798037196799 E102 -S111 0.0239324138065991 R89 -K96 0.0188696855983022 K99 -I108 0.00982962296011447 E102 -T109 0.00257357281204484 A92 -K100 0.00200626866096343 Q97 -E106 -0.0118218341744221 E95 -K100 -0.0165821326850981 E102 -T107 -0.024315818049133 E93 -S98 -0.0277913043462679 K91 -S98 -0.0287316240300841 K105 -A112 -0.0287891363302868 E95 -K104 -0.0296782180540459 K91 -K99 -0.0363463049102748 K104 -A112 -0.0392731813009641 S98 -T107 -0.0416278054709641 R89 -Q97 -0.0449893464215849 K100 -T107 -0.0455875948609501 V94 -K100 -0.0560685530668508 S98 -K104 -0.0603835296260287 K104 -S111 -0.0614135632475964 K96 -K104 -0.0870585227173528 S98 -E106 -0.0931018874025451 V94 -K99 -0.0955522579107466 E102 -A112 -0.100735572694683 R89 -S98 -0.105030424931855 K105 -S111 -0.108964001129187 Q97 -K104 -0.110213227188998 L90 -E95 -0.115598376639536 I108 -G113 -0.120323922931815 K104 -G113 -0.124351994102482 K91 -K100 -0.130240961239294 K104 -T109 -0.137988479210424 K103 -A112 -0.140959388095671 K105 -E110 -0.143073920882335 S98 -K103 -0.165010793055856 K91 -Q97 -0.165978376493119 L101 -I108 -0.174470517022129 E102 -I108 -0.176321578208061 L101 -S111 -0.190686165429817 E95 -E102 -0.191986793028088 A92 -S98 -0.19438001746767 K99 -E106 -0.199444586751673 V94 -K103 -0.208557863311821 L90 -K96 -0.210629335012403 E95 -L101 -0.210645323896924 Q97 -K103 -0.222079341313082 L90 -K99 -0.223164292646693 Q97 -E102 -0.226262286297731 T107 -A112 -0.226843552738885 L90 -Q97 -0.239640984790834 K96 -K105 -0.239979952728413 K103 -T109 -0.265206157212754 A92 -K99 -0.340143422050128 K91 -K96 -0.381256982738328 K99 -K104 -0.388109632457572 K100 -K105 -0.393101944281388