[Mon Aug 29 16:46:24 2016] >Input file: TMP16899S2G.pdb >TM segments: 788-809 MAIDEN score = -7.4268 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q790 -L795 0.311126378020841 E801 -V806 0.209349883666942 E801 -A809 0.192432093616326 L795 -K800 0.184007898435906 L797 -Q805 0.118177246928802 N794 -A802 0.112498428045896 E792 -E801 0.0939655717950946 E789 -L795 0.0918794442895743 K800 -Q805 0.091323011909921 E792 -L798 0.0896590395451987 S796 -Q805 0.0861880718815398 L795 -E801 0.084409047176367 Q790 -L799 0.0731191114323106 K800 -I808 0.0707216228136653 Q790 -L798 0.0636636916273021 A793 -E801 0.0624560548401165 L798 -Q807 0.0591012959851431 S796 -L804 0.0511580468796184 N794 -K800 0.0501012514877397 H791 -L799 0.0461100631085178 N794 -E801 0.0281948717314329 N794 -L799 0.0257962208419644 L799 -Q807 0.0255845920798734 E792 -K800 0.0156909171722983 A802 -Q807 0.0138278861093637 E789 -L797 -0.0100078993545668 I788 -S796 -0.0144813875367934 H791 -K800 -0.022515897200905 N794 -A803 -0.0433373484249568 A793 -A802 -0.0459680706460768 E792 -L799 -0.0577460777231913 Q790 -S796 -0.0578900833821683 K800 -Q807 -0.0646940947097443 E789 -S796 -0.0732212530607357 L799 -I808 -0.0744833966596836 E801 -Q807 -0.0788020877772606 E792 -L797 -0.080394203971359 Q790 -L797 -0.0987031540376417 I788 -L797 -0.101013651751792 S796 -E801 -0.101058580226044 L795 -A803 -0.107392862069445 L797 -V806 -0.108865873114197 L797 -L804 -0.124618906705332 L795 -L804 -0.137547202700762 E789 -N794 -0.144952727168739 K800 -A809 -0.149055645601302 E789 -L798 -0.165311332724311 L799 -V806 -0.169014227162005 E801 -I808 -0.169295733052325 K800 -V806 -0.169943754563053 H791 -L797 -0.179947912058057 A793 -L799 -0.189689306324047 L798 -Q805 -0.193346383384482 A802 -A809 -0.195345807379914 S796 -A803 -0.199425508533944 S796 -A802 -0.227412526773161 A803 -A809 -0.229712201510699 L798 -V806 -0.232862100126508 L797 -A803 -0.237511066855556 L798 -A803 -0.23960442630965 A793 -L798 -0.244448150940432 L795 -A802 -0.246763521622999 H791 -L798 -0.253753413590903 I788 -N794 -0.258407829158591 L804 -A809 -0.290242456011751 L797 -A802 -0.302781179332741 A793 -K800 -0.33502652945553 I788 -L795 -0.337601030344905 A802 -I808 -0.342293639288407 H791 -S796 -0.357701349789436 L799 -L804 -0.399308739152112 A803 -I808 -0.402646665328311 L798 -L804 -0.455348793326015 I788 -A793 -0.462260008728034 L799 -Q805 -0.493565716060217