[Fri Aug 26 16:50:41 2016] >Input file: TMP25506M1D.pdb >TM segments: 303-329 MAIDEN score = 3.3594 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V315 -N321 2.83865251636581 V315 -I320 0.977442481186383 A312 -N321 0.608359074776667 L311 -N321 0.428088766863071 S314 -I320 0.376428587202648 L311 -V322 0.343175534831519 V315 -V322 0.336129850688801 G316 -S328 0.29125281604624 S314 -A323 0.254620149430251 P303 -T308 0.209822913632234 L313 -T318 0.208269581437603 A312 -S328 0.207656112429603 G310 -V322 0.201707360939319 G316 -V322 0.19075434030754 G316 -H329 0.17733154826645 G319 -A326 0.164123831832829 S314 -S325 0.155239687954163 V315 -S325 0.15206585744041 G310 -L317 0.146179925899639 G310 -T318 0.140348094480177 G310 -G319 0.136286106157756 N321 -A326 0.133189960625504 T308 -T318 0.132954233684901 T308 -G316 0.132686278850106 L313 -N321 0.129600835156155 L307 -N321 0.128299562560311 L309 -V315 0.125547100844452 P303 -G310 0.123602367556689 A305 -S314 0.120025326794078 A305 -S325 0.118849759635641 A304 -A323 0.118485375406015 G316 -A323 0.115978144890396 A306 -S314 0.109693231504437 G310 -V315 0.108505627596518 G310 -A323 0.106762279164171 L307 -S314 0.1066423719154 V322 -H329 0.105248883109636 G319 -H329 0.101408400375293 A305 -V315 0.10102635714701 A306 -L313 0.0957374802298938 L309 -L317 0.0949758276984638 A305 -L313 0.093686183136473 T318 -H329 0.092325475193672 L307 -A312 0.0911681741501109 L317 -A323 0.0844859177173785 A312 -G319 0.0798813928324886 L313 -V322 0.0785759220899758 V322 -L327 0.0777649889073142 I320 -S325 0.0731097363554403 L309 -S314 0.0727830710734256 L309 -A323 0.0723372883903242 S314 -S328 0.0715642837244643 A304 -L313 0.0662688183444047 A305 -A323 0.0660437631433481 A304 -V322 0.0647945242352295 L313 -A323 0.0647062608409064 G316 -V324 0.0585480625194839 I320 -S328 0.0556293095574736 A312 -H329 0.0511559336506124 G316 -S325 0.0496474197139429 S314 -H329 0.0480793447843066 T308 -I320 0.0466306960032532 L311 -G319 0.0426328261533744 A304 -A312 0.0416293316087595 G319 -S325 0.0383282961610071 S314 -N321 0.0282902944834849 G310 -N321 0.0230676357310124 L307 -V324 0.0223301625719927 A306 -V322 0.0209190203349578 L313 -V324 0.0203616517326473 L317 -H329 0.0196318724099721 A312 -S325 0.0181097274859203 A323 -H329 0.0149702551482471 A305 -V322 0.0117227109736682 V315 -A326 0.0106923786521467 T308 -S325 0.00963811440532414 T308 -V324 0.00867038099989692 G316 -L327 0.00794340021899931 P303 -A312 0.00723087117967292 S314 -V324 0.00661700093271778 A306 -A323 0.00476957195274608 L307 -V315 0.00366687848208525 L307 -G316 0.000428998447270401 L309 -V324 -0.00308369492264937 G319 -L327 -0.00561768451920819 T318 -V324 -0.00773716173263672 L313 -S328 -0.00962143959586115 A312 -V324 -0.0117603886138937 G310 -G316 -0.016975594202342 A312 -L327 -0.0311904332007389 A312 -V322 -0.0317701293877031 T318 -S328 -0.0318348490202395 L309 -N321 -0.0385207215105946 L311 -A323 -0.0405810254655617 G319 -V324 -0.0449502387189291 S314 -V322 -0.0453823123930053 T318 -A323 -0.0456534176031758 T308 -L317 -0.0476736703579155 L309 -S325 -0.0525199959505693 A305 -V324 -0.0526831051892822 V315 -H329 -0.053408229494627 A306 -V315 -0.0534336624787382 L311 -S328 -0.0555344855898605 L317 -S328 -0.0613061334782836 L309 -T318 -0.0634286579138994 L307 -A323 -0.0647620440329897 N321 -L327 -0.0676116649026545 A312 -I320 -0.0771875237510216 L311 -I320 -0.0792624980699466 L313 -I320 -0.0864572901667371 A312 -T318 -0.0898620370637857 L307 -V322 -0.0933291895820689 A304 -G310 -0.0984910369888987 L311 -S325 -0.101299259145386 I320 -A326 -0.101353298992039 A304 -L309 -0.101938044063139 G310 -I320 -0.103936969123337 L309 -G316 -0.110103572084659 P303 -L311 -0.112791632409245 N321 -H329 -0.113484201427711 A305 -G310 -0.115925008978136 G319 -S328 -0.125079394719586 G316 -N321 -0.129797329732452 L317 -V322 -0.140821995031017 A306 -L311 -0.141644601610363 A323 -S328 -0.14213620700812 L311 -G316 -0.142207069507667 I320 -H329 -0.146021859557058 A305 -L311 -0.157397869521686 A312 -L317 -0.159395606503248 I320 -L327 -0.161952090601859 V315 -L327 -0.166109570633921 A306 -A312 -0.171953614800813 V324 -H329 -0.173142322909892 L313 -G319 -0.174371864095691 A312 -A323 -0.183634369353627 T308 -L313 -0.184541351183854 L307 -L313 -0.188389390156565 L311 -L317 -0.190400723764636 S314 -G319 -0.190727407931542 T308 -V322 -0.192781763323865 T308 -N321 -0.195715052293081 T308 -A323 -0.203810333437929 A304 -L311 -0.215803311792783 T308 -V315 -0.215851450290358 L311 -T318 -0.21993290695484 L311 -V324 -0.222230356099712 A305 -A312 -0.227170387855959 T308 -S314 -0.232646872194934 L309 -V322 -0.234006146172628 N321 -S328 -0.242815913958043 V315 -V324 -0.249403876073423 V315 -A323 -0.259814380656762 V322 -S328 -0.326074883308268 V315 -S328 -0.330411986749612 P303 -L309 -0.353887392440337