[Mon Aug 29 16:57:13 2016] >Input file: TMP27977M1G.pdb >TM segments: 578-614_ 655-673 MAIDEN score = -23.9858 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K598 -K605 0.453865114537551 E591 -T671 0.444418335141304 Q594 -Y664 0.429007120954205 N608 -W655 0.371442301255519 R660 -L665 0.341819417382036 Q583 -E591 0.33760931172332 K605 -A613 0.333353395704432 E591 -L673 0.322129220710885 Q593 -E666 0.316818154989759 Q582 -L587 0.303428578479906 L597 -E666 0.30242080815528 L587 -L673 0.295371634272382 T600 -E666 0.268003236742177 R660 -N668 0.267810539144059 R660 -E666 0.253746490428775 Q595 -G667 0.248733274348398 Q595 -G603 0.245753638168795 Q583 -Q672 0.244061141163338 Q594 -I669 0.239108177029063 E659 -Y664 0.219615614065156 I601 -N606 0.211469491648215 K598 -Y664 0.209708938711759 I601 -I662 0.204302286769658 Y664 -Q672 0.203423031387047 K598 -W658 0.20212229837536 K598 -I662 0.195794898027348 A588 -T670 0.192098509228947 A609 -E659 0.189495772491598 K584 -E591 0.185883981604322 N606 -L614 0.184826066653465 Q583 -A588 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