[Mon Aug 29 16:59:29 2016] >Input file: TMP32536M1G.pdb >TM segments: 555-576_ 620-635 MAIDEN score = -16.5286 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R560 -I624 0.443354577707499 K567 -Q622 0.439599337096266 T562 -E628 0.325469702102566 R560 -N630 0.31994129269273 Q555 -E628 0.30612582354587 Q556 -E633 0.293135148897472 R560 -N568 0.267777631200652 Q570 -Q622 0.261188945686201 N626 -I631 0.260676754708726 R560 -N626 0.22266063684919 K567 -A575 0.210093307816452 R560 -K567 0.205747739091082 L627 -E633 0.204695258531561 R560 -E628 0.202007063615091 L559 -E628 0.199833078045768 E621 -A629 0.197609978594075 Q570 -E621 0.193751929439257 Q555 -R560 0.188507070598385 V563 -R623 0.188226337294681 W564 -R625 0.164739101222233 K567 -R623 0.160113546644199 V563 -A629 0.149665913009988 T566 -W620 0.146905853457266 L559 -K567 0.143006088653598 E621 -N630 0.128193472450145 G565 -E621 0.126205475779059 E557 -N630 0.125938637446788 G565 -I624 0.117589691371351 T562 -Q570 0.117010123089943 N626 -S634 0.10891112543502 R560 -R625 0.105055062365762 E557 -S634 0.105021552448577 L627 -L635 0.096869652760923 V563 -I624 0.0915571747872779 M558 -T566 0.0902554404423239 R560 -E621 0.0858130755280837 Q556 -L561 0.0846910822786024 Q570 -I576 0.0825368409992917 M558 -I624 0.0810909577657366 N568 -A575 0.0810553753720331 Q556 -R625 0.0796912086694728 E557 -G565 0.0765108680527933 Q556 -L635 0.0762232314280542 Q622 -L627 0.0749955216347709 R625 -S632 0.0748907716851371 E621 -L627 0.0698677914414301 T562 -R625 0.0690690646500221 L561 -R625 0.0686685757551548 R560 -Q622 0.0684974434351205 W564 -R572 0.0665782927630998 R560 -S632 0.0650057294046555 T566 -R625 0.0649408279627391 E557 -E633 0.0644409611769877 V563 -L627 0.0642481822091669 V563 -V573 0.0610369975810414 L561 -Q570 0.0605910292782115 V563 -A571 0.0543495453249827 E557 -A629 0.0501127467224274 N568 -I576 0.0475837384318476 E557 -L627 0.0472875845505492 Q556 -A629 0.0442028721509575 E557 -I624 0.044025812855045 L559 -S632 0.0437244519081537 N630 -L635 0.0425178883318416 Q622 -A629 0.0398538226677285 Q555 -S634 0.0316637660787082 T562 -R623 0.0313420766388068 T562 -N568 0.0312359080092883 K567 -E628 0.0293854303273799 N568 -R625 0.0291422392220575 M558 -A629 0.0260133470093957 L561 -I631 0.024200899458374 L561 -E628 0.0223497823446546 R625 -E633 0.0192613827533057 L569 -E621 0.0169743549618442 A571 -E621 0.0162994255420177 Q555 -I624 0.0162964197551823 Q570 -W620 0.0130711208917 L559 -A629 0.009110296133783 E557 -S632 0.00697750688315474 Q570 -A575 0.0067352556476008 W620 -R625 0.00660647644115631 E628 -S634 0.0057299670957871 Q555 -L627 0.00476201040817514 T566 -E621 0.000740598494445521 G565 -T574 -0.00140192886395463 Q555 -E633 -0.00146451936815484 N626 -S632 -0.00278659516352064 V563 -E621 -0.00502452585385171 M558 -E628 -0.00730067873548679 Q555 -L635 -0.01344366001037 Q556 -G565 -0.0134807337966469 R623 -I631 -0.0159493992394033 R560 -G565 -0.0159800481952164 R560 -E633 -0.0172319691064127 I624 -S632 -0.0179248645228931 Q556 -N630 -0.0187353724147141 Q556 -T562 -0.0221956771898995 Q555 -V563 -0.0222643093506885 V563 -Q622 -0.0223450151176482 Q556 -I624 -0.0235410027144726 N626 -E633 -0.0239415497468602 T566 -Q622 -0.0240507634920228 Q622 -N630 -0.0245033956099459 W620 -N626 -0.024608415277886 I624 -S634 -0.0277738185942722 L559 -L627 -0.0278835504365889 I624 -N630 -0.0316017977340666 N568 -E621 -0.0327271142884535 T562 -A571 -0.0328741426298518 A571 -W620 -0.0364083925525724 K567 -I576 -0.0374358797688004 Q555 -S632 -0.0379438647498773 M558 -G565 -0.0389837829755706 T574 -E621 -0.0394953500275221 V563 -S632 -0.0426506177604842 T566 -A575 -0.0436054209301935 T562 -W620 -0.043973289058435 T566 -I576 -0.0456798257163 R560 -T566 -0.0484606972675394 T566 -R572 -0.0485380416231149 R560 -R623 -0.0488492555578992 T566 -R623 -0.0488839661113201 K567 -V573 -0.0492345632174018 E557 -L635 -0.0516661051174889 M558 -I631 -0.0520925842534881 R623 -E628 -0.0528170094412238 Q622 -E628 -0.0528621527531952 K567 -E621 -0.0550509966531614 Q556 -W564 -0.0555424949772454 L627 -S632 -0.0560513557063853 R623 -S632 -0.0615623838871491 V563 -N626 -0.0629151599804745 Q556 -S632 -0.067787866251205 G565 -E628 -0.0699068013632242 T574 -W620 -0.0702605650173911 L561 -A629 -0.0718965102119995 L559 -R625 -0.0739974151778586 Q556 -I631 -0.0747855447813279 V563 -N568 -0.0756129945520545 W564 -Q622 -0.0769590640010851 N568 -T574 -0.0779432565564253 L559 -R623 -0.0801628929467775 Q556 -N626 -0.0816983917170691 M558 -L635 -0.0850850328125274 Q555 -A629 -0.0853852584865988 L559 -I631 -0.0880561290447339 M558 -L627 -0.0932067844296349 E557 -T562 -0.0950240871599686 K567 -N626 -0.0950541129431529 M558 -S632 -0.0952780978219776 W620 -A629 -0.0956949160709164 V563 -I631 -0.0959939659893512 T562 -E621 -0.0981093750692992 M558 -K567 -0.0981196793957041 K567 -R625 -0.0989201986363675 V563 -N630 -0.100147379527145 K567 -T574 -0.100266332251136 L559 -E621 -0.100969028586805 R625 -S634 -0.102298430920596 R560 -L635 -0.105924734271138 V563 -E628 -0.107748854186926 T562 -L627 -0.107981652016689 Q555 -W564 -0.108455701440202 E628 -E633 -0.109670519460323 N568 -I624 -0.110373970726068 N626 -L635 -0.112162084800988 E557 -E628 -0.114852042444804 W564 -Q570 -0.116074336556577 T566 -E628 -0.117120670691123 W564 -W620 -0.117847832929951 E557 -R625 -0.119198992629984 K567 -R572 -0.119890773171516 W620 -L627 -0.124028217210361 G565 -R572 -0.129283285015674 L561 -I624 -0.129831120730926 R560 -L569 -0.130744587462802 Q555 -I631 -0.134105853432816 T562 -I624 -0.134637942741358 W564 -L627 -0.136454572069857 W564 -A629 -0.136658777213249 Q555 -N630 -0.13761448411292 G565 -A571 -0.139450535059943 L559 -N630 -0.141595859295001 R625 -I631 -0.142857186650618 Q622 -I631 -0.143137853466049 Q570 -I624 -0.143308886702268 T566 -I624 -0.144095923478994 L561 -N568 -0.144215186821068 N568 -V573 -0.14944418279243 T562 -K567 -0.150613295477043 V563 -R625 -0.151380841374169 L559 -N568 -0.151426569749876 L561 -L627 -0.154521949551028 L559 -L635 -0.156168614192935 E557 -W564 -0.158962261680769 W564 -E628 -0.159164845381777 L569 -W620 -0.159661853777066 W564 -E621 -0.160012620285458 I624 -E633 -0.160384924552511 G565 -V573 -0.162848337819881 L561 -E621 -0.165147371621297 E557 -I631 -0.166584234521929 R623 -N630 -0.168076127087698 G565 -Q570 -0.168798281019545 G565 -R625 -0.169558754812299 R623 -A629 -0.171405149067766 Q555 -T562 -0.173213505638074 R560 -W620 -0.175945714053885 L561 -K567 -0.175970412708255 L561 -L569 -0.177806970455158 L561 -S632 -0.18021208693518 W564 -V573 -0.182076171425047 W564 -L569 -0.184398391377631 L559 -N626 -0.184715429507632 W564 -R623 -0.185223361669894 T566 -V573 -0.185795121025701 E557 -V563 -0.185976719425235 E621 -N626 -0.186740899855108 E557 -T566 -0.188859419100338 Q556 -S634 -0.189068172385267 W620 -E628 -0.196577624566711 A629 -L635 -0.202925092134293 R560 -L627 -0.205802081509038 G565 -W620 -0.208560522297191 E621 -E628 -0.209831262350724 L559 -W620 -0.20990453564744 E628 -L635 -0.210425352262391 N568 -W620 -0.223558162232877 L559 -W564 -0.223863847393003 Q556 -L627 -0.224338819616183 T562 -L569 -0.226797738923842 W564 -A571 -0.23478520497138 V563 -Q570 -0.235816191856959 W564 -N626 -0.24480559241926 R560 -A629 -0.251946604710451 L559 -T566 -0.252423123526125 I624 -I631 -0.255474400219056 L627 -S634 -0.275223812800045 L569 -T574 -0.275576217926756 V563 -R572 -0.287225077259297 Q556 -V563 -0.295127899070807 Q556 -E628 -0.302651900775373 L561 -T566 -0.307691280976847 L569 -A575 -0.316748130483573 K567 -W620 -0.325970833183412 R560 -I631 -0.326825355676076 W564 -I624 -0.332617773481746 L569 -I576 -0.333491643820271 L559 -I624 -0.333648039885504 T566 -A571 -0.341066836812432 L559 -G565 -0.345164944708781 R625 -N630 -0.345207569245717 K567 -I624 -0.359512937017118 M558 -V563 -0.369207931970911 T566 -T574 -0.387883640453168 V563 -W620 -0.401025638698748 V563 -L569 -0.403193388247879 A629 -S634 -0.413482329264152 M558 -W564 -0.416014367501495 I624 -A629 -0.446959960791528 A571 -I576 -0.451621057726578 Q555 -L561 -0.477208939181663