[Fri Aug 26 17:10:19 2016] >Input file: TMP61552S1D.pdb >TM segments: 433-465 MAIDEN score = -10.1167 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R456 -L461 0.456285281610592 R443 -V448 0.431624939615059 V451 -R456 0.412095729278859 E436 -Q444 0.319361748097258 R457 -L462 0.299647288866453 A449 -Q454 0.283821339903147 L438 -R443 0.275920210223947 S434 -Q442 0.23129917650703 R456 -A464 0.231235137091971 Q444 -A449 0.196579132710069 R456 -E465 0.159707177141087 L459 -A464 0.153314284593506 A449 -R457 0.145460701010746 A435 -R443 0.138505477186818 Q454 -L459 0.133149223996619 Q450 -N455 0.113107421115109 A449 -L459 0.111711157260627 T446 -N455 0.0988242673016559 L441 -Q450 0.0979896685716288 Q450 -L459 0.0945367979657132 T446 -Q454 0.0868566304606242 S437 -S447 0.0822646237573261 R443 -V451 0.0755344202798769 S437 -T446 0.0737727853641099 A449 -A458 0.0699384197415034 S434 -S440 0.0683035716196272 Q450 -A458 0.0664941521982199 R443 -A453 0.0645040704964622 V448 -R456 0.0585320258573341 Q444 -A452 0.0465669748078541 S440 -V448 0.0461939076223516 A435 -Q442 0.0458925511726367 Q450 -R457 0.0438894454992917 A452 -D460 0.0430077096430157 Q454 -L462 0.0426039070444633 S434 -Q444 0.0388110594326183 T446 -R456 0.0314394697121815 A433 -L441 0.0261391785531719 I445 -A453 0.0235337087793774 A439 -Q444 0.0225164241388391 L459 -E465 0.0214006735775341 S447 -N455 0.0180276308950218 V451 -L461 0.0120840846068533 A439 -S447 0.0112215974635288 Q442 -A452 0.00468170836432713 N455 -A464 -0.00162682228852618 R443 -Q450 -0.0033070303563032 Q442 -V451 -0.00479117064395318 A452 -R457 -0.0136939568297477 S437 -I445 -0.0140324775487983 Q454 -T463 -0.0173548035151931 E436 -R443 -0.0180908676691779 A453 -D460 -0.0242519630644189 Q454 -A464 -0.0251561187376996 Q444 -A453 -0.0276152075631542 D460 -E465 -0.0355001846569656 R457 -T463 -0.0417315436466328 A439 -V448 -0.0445202892267349 N455 -L461 -0.0500464286882796 V448 -A458 -0.0518176815842795 N455 -D460 -0.0526735395703437 N455 -T463 -0.055239027265074 L441 -A449 -0.0581363209144081 L438 -T446 -0.0599551012120845 A435 -Q444 -0.0609627995972781 A433 -Q442 -0.0634662441727221 A458 -E465 -0.0677787330271515 T446 -V451 -0.0693882088582685 V451 -D460 -0.0729057770715933 S437 -R443 -0.0752937422493818 S437 -Q444 -0.0784228350614826 E436 -Q442 -0.0827703186078534 A452 -L461 -0.0842529218386723 Q454 -D460 -0.0854919852647249 S437 -Q442 -0.0856456292247162 S447 -R456 -0.0918760965607981 S434 -R443 -0.0941878670770395 Q442 -S447 -0.0951258747452322 I445 -Q454 -0.0971397092273327 A453 -L461 -0.102931752756925 E436 -L441 -0.109612108516703 S440 -S447 -0.114031324779885 A439 -T446 -0.114821773504552 T446 -A453 -0.117249740677864 Q442 -A449 -0.123953599574536 S440 -A449 -0.125244402711026 A453 -L462 -0.135225092294909 E436 -I445 -0.137446003808992 I445 -N455 -0.139947232057711 Q442 -Q450 -0.142565136054482 S447 -Q454 -0.145506943802782 R456 -T463 -0.14573513247651 Q450 -R456 -0.15094948364851 T446 -A452 -0.157363587017175 R443 -A452 -0.160908465289301 R457 -E465 -0.161196758645403 L438 -S447 -0.163434868336369 L441 -V448 -0.164836517529037 Q444 -V451 -0.167203101236027 S440 -I445 -0.169314205724791 V451 -R457 -0.171903517566783 V448 -N455 -0.17316224658032 A449 -R456 -0.177194977852892 L441 -S447 -0.181485917065627 R456 -L462 -0.182536619728 S434 -L441 -0.182584109049696 A433 -A439 -0.184632600042394 A452 -L459 -0.191777502985555 A433 -S440 -0.193933721333732 A435 -L441 -0.194076538362028 R457 -A464 -0.194635359593615 N455 -L462 -0.196063525025421 S447 -A453 -0.199156666973163 R443 -A449 -0.202527657813078 A453 -L459 -0.204679208290502 V448 -R457 -0.215748675512565 V451 -L459 -0.222066559591064 A449 -N455 -0.224362864464806 A452 -A458 -0.227089039788344 S440 -T446 -0.232811200897963 A458 -A464 -0.23365067114058 Q454 -L461 -0.238922833898812 A458 -T463 -0.257281615242711 A435 -S440 -0.267521824370064 V451 -A458 -0.288698731416098 L441 -T446 -0.295310118602084 A433 -L438 -0.303090357410103 L438 -I445 -0.316355555229778 A439 -I445 -0.323140694535097 S434 -A439 -0.337112781909397 I445 -Q450 -0.342919828408012 I445 -A452 -0.344305155342345 Q444 -Q450 -0.348445199796727 V448 -A453 -0.367997437627242 V448 -Q454 -0.397606734645095 A453 -A458 -0.405064543780831 Q442 -V448 -0.433178247595002 I445 -V451 -0.447819058089072 L438 -Q444 -0.469168571078697 S447 -A452 -0.501362257883055