[Mon Aug 29 17:29:47 2016] >Input file: TMQ05KR1M1G.pdb >TM segments: 66-104 MAIDEN score = 25.2692 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D86 -H92 10 Y75 -K80 10 R90 -V101 1.1133333946459 E66 -I72 1.09964410555112 Q93 -L98 1.05292548486219 I91 -W99 1.02658733391096 I91 -F100 0.991116995870359 R90 -P102 0.896781484998465 I73 -I83 0.874295603760022 W74 -I83 0.821262832658731 I91 -V101 0.759854343716308 I73 -K80 0.662972508835976 P82 -Q93 0.603404166218112 D86 -H97 0.585721272254219 W74 -L98 0.583124088050589 I83 -H92 0.559890802048908 I72 -N95 0.55966860044656 H92 -L98 0.554273605978205 D88 -F100 0.521996876356917 I83 -D88 0.51812887710318 I91 -L98 0.454876434659024 P82 -I91 0.441162830866285 D86 -Q93 0.435596313408339 Q93 -W99 0.421102639101953 S84 -H97 0.379437882389456 S89 -V101 0.377758032470251 P82 -W99 0.352500142413057 I73 -T81 0.337327392622835 K87 -H97 0.320275082583957 W74 -T81 0.31119597477603 S84 -Q94 0.309728376085816 K76 -P82 0.306852427100827 P82 -Q94 0.298599409483601 T71 -P82 0.29355390458264 K80 -Q93 0.280505611400865 I72 -E96 0.276317432484699 M67 -Q94 0.275484445149047 Y75 -H97 0.270259186073221 M67 -I72 0.253806986822153 T81 -Q94 0.246344227848588 H92 -F100 0.229295668145971 K87 -Q93 0.221683275436793 S89 -A103 0.215516091826155 T81 -W99 0.210961995901757 W99 -K104 0.210742068084563 Y75 -F100 0.207994641967158 Y75 -H92 0.207942014092199 A85 -R90 0.205189897272452 D86 -Q94 0.195803159698523 T81 -D86 0.18786946413867 M67 -S84 0.186975548370101 W74 -K87 0.184876403147434 T71 -H97 0.184197872216381 D88 -K104 0.183259602359136 G70 -N95 0.182201610874844 D86 -F100 0.18210476294499 Y75 -T81 0.180413919075425 D88 -P102 0.177217109313869 K76 -F100 0.176139980347162 H68 -E96 0.174821178742861 T71 -K80 0.167798881652713 E66 -H97 0.164475624210808 T81 -H97 0.161704949512668 I73 -I91 0.161337618088521 S89 -L98 0.159943560520762 T71 -T81 0.158508045478766 K80 -D88 0.154187729870376 Q94 -F100 0.144708965706183 Y75 -S84 0.136348759066085 K76 -I91 0.128541268453699 E66 -Q94 0.128156338675613 K76 -I83 0.125451781583563 I83 -S89 0.125261128646879 G70 -I83 0.123145761415177 K80 -I91 0.122991709086176 M67 -I83 0.121797167215284 S84 -R90 0.118180179613817 K80 -L98 0.116092405877151 I73 -K87 0.112368171576822 T71 -S84 0.107012494200269 R90 -K104 0.0945680510090128 K76 -D88 0.090275314899695 P82 -D88 0.0886735882865208 I73 -D78 0.0861830333931463 I72 -P82 0.0839103268443353 A85 -Q93 0.079497235412231 H92 -P102 0.0768446985707563 R90 -F100 0.0763511564742472 G70 -E96 0.0759187029111015 T71 -A85 0.0751896805805852 M67 -E96 0.0723445082374511 K76 -H97 0.0694125193401538 P82 -K87 0.0641469393759309 I73 -H92 0.0616618571160861 S79 -D88 0.0596411134163757 P82 -V101 0.057364742429372 Q93 -V101 0.0521702296999342 S84 -N95 0.0499143768969965 K76 -W99 0.0482715483733021 H92 -H97 0.0474051166893537 T81 -S89 0.0459358828895597 Y75 -E96 0.0457642904844011 W74 -D88 0.0454594740128842 E66 -W74 0.044810539291366 S89 -Q94 0.0445979073764775 S84 -F100 0.0439673962056801 P82 -H92 0.0425855787630331 G69 -N95 0.0423405144778863 T81 -R90 0.0410237523595001 L98 -A103 0.0383840487360922 D88 -Q94 0.0345020819639896 G70 -Q94 0.0338529832154624 T81 -A103 0.0319254764206108 D86 -N95 0.0278514147356276 T81 -F100 0.0275847840257626 D88 -A103 0.0244517377852754 K87 -V101 0.0237769152379681 W74 -E96 0.0233768107598626 S84 -W99 0.0230551269010153 I91 -E96 0.0218353937154872 M67 -H97 0.0200748782631655 I73 -Q93 0.0184582601692709 W74 -Q94 0.015504556170631 T71 -E96 0.014295537242359 I72 -W99 0.014245360701 Y75 -K87 0.0140146582045693 I72 -H92 0.0126143411996311 I72 -Q93 0.0125407336059267 S89 -K104 0.0115678695514729 H92 -V101 0.0107121739636735 H68 -I73 0.010167011046106 E66 -Q93 0.00967393886408985 W74 -N95 0.00738958485779184 G70 -Y75 0.00464107724538465 I91 -K104 0.00198088298434307 K76 -T81 0.00155800779922671 K76 -H92 0.000345061445769623 Q94 -V101 -0.000345835653427828 Y75 -R90 -0.00236280971609985 P82 -F100 -0.00287757379812925 W74 -H92 -0.0039350139531269 S79 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