[Fri Aug 26 17:37:07 2016] >Input file: TMQ09SZ7M2D.pdb >TM segments: 319-351 MAIDEN score = -9.4656 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V337 -K347 0.649906820511619 S345 -R351 0.588843393045033 L341 -R351 0.531194660949302 V337 -S342 0.407422463627901 T338 -S346 0.396376611374119 L343 -R351 0.360411781207171 A328 -G335 0.276656999677778 G336 -L343 0.27505355277835 S325 -G332 0.244309671243248 T338 -L343 0.242887461684662 A334 -S342 0.227591602532316 T338 -K347 0.224610427046962 G336 -S346 0.216271494563383 A334 -R351 0.214728526339564 G330 -T338 0.207763283096127 A334 -S340 0.203663570906198 A334 -S346 0.192696221326977 L327 -G335 0.177855842098709 I321 -A328 0.173161519435125 W322 -G330 0.163878558604516 A329 -G339 0.161636831452177 V337 -S348 0.14551132754733 L323 -I333 0.134502783608263 T331 -G339 0.134035497885811 S340 -L350 0.128450937225194 G335 -K347 0.127094157550425 S342 -L350 0.11981068225715 A334 -L341 0.116931720348515 L343 -L349 0.114388422878861 V324 -G332 0.11419371492514 S325 -A334 0.11339744783083 G336 -A344 0.109548081253014 G336 -L341 0.0967031551778526 A334 -L350 0.0857254941165246 G339 -L350 0.0848120233599756 L341 -S346 0.083752379755726 G330 -G339 0.071547650795367 T338 -R351 0.0703654385502163 V324 -T331 0.0695436369171751 A320 -A328 0.0654900223899211 G332 -S340 0.0638254754451286 G335 -A344 0.0636220730331816 L343 -L350 0.0598564416185967 G339 -L349 0.0587187291973458 G336 -K347 0.0560587800801315 T338 -L350 0.0547157883094851 G335 -L349 0.0545187498422947 W322 -G332 0.0522329473654595 I333 -L349 0.0505391219274789 V337 -A344 0.0467437112664806 G336 -S348 0.0433537417685061 A344 -L349 0.0432220269733903 A334 -S348 0.0430336174553045 G332 -L341 0.0423965063306535 G339 -S348 0.0422952877539607 I333 -S340 0.039823680728035 G336 -L350 0.0390758725849436 G335 -L343 0.0382334432467699 A320 -L327 0.0372505950594659 A328 -G336 0.0350996935513939 G335 -S346 0.03315987702079 S340 -R351 0.0330442826676542 L341 -K347 0.0159647718347045 G335 -R351 0.0119166228290186 A326 -A334 0.0117871017461172 G335 -S345 0.011587148299733 A344 -L350 0.0093139539405227 S340 -S348 0.00652261825408595 S340 -L349 0.00380075877455255 S342 -L349 0.00210790713000009 T331 -S340 0.00139778709033767 A328 -V337 0.00114156393418874 G336 -S345 0.00016593196058734 A326 -G336 -0.000935509711680105 L323 -A329 -0.00662104678936637 L327 -G336 -0.00903900231696575 S325 -I333 -0.0131658580216476 G336 -L349 -0.0140239470726589 G330 -V337 -0.0181801002314632 G335 -S348 -0.0182776805710536 A329 -V337 -0.0184106234655612 L323 -T331 -0.0227329088767174 L327 -I333 -0.0229863937099868 G339 -R351 -0.023875266885518 G336 -R351 -0.0245161969112401 I333 -K347 -0.025783157052401 G335 -L350 -0.0265906898604797 A329 -T338 -0.0268213872584355 G332 -S342 -0.0318761434582071 I333 -R351 -0.0348241083778351 W322 -T331 -0.0391670738859287 A326 -I333 -0.041365474943273 V337 -S346 -0.0447735664895814 G339 -K347 -0.0452522509266438 S340 -K347 -0.0555447709175942 L323 -G332 -0.0576303016438979 A326 -G335 -0.0604089238965311 I321 -A329 -0.062784830259675 A320 -A329 -0.0678511308742251 V324 -I333 -0.0680333625109686 L327 -A334 -0.0787082789899065 I333 -S342 -0.0787827574480442 V337 -S345 -0.08010287294195 A334 -L343 -0.0813989502275945 L343 -S348 -0.0877989241359503 I333 -S346 -0.0898117286588909 V337 -L349 -0.0908831146176698 T331 -T338 -0.0961237744816259 G336 -S342 -0.0966603075508463 I319 -S325 -0.0988311661865691 I321 -G330 -0.103263422118077 G339 -A344 -0.112259655581388 I333 -S348 -0.113929280769875 I319 -A329 -0.117731714449762 S342 -S348 -0.121852909069867 G339 -S345 -0.123654268446963 G339 -S346 -0.128002240798297 G330 -G336 -0.128846487131928 I333 -L341 -0.141318266827231 I319 -A328 -0.149553032196113 W322 -A329 -0.14964329980536 G335 -S342 -0.150215783325069 L327 -G332 -0.150534791292534 A326 -T331 -0.154311550657385 V337 -R351 -0.15642454987272 G332 -G339 -0.161998798486639 I319 -L327 -0.163763516569342 V324 -G330 -0.17087723558044 W322 -A328 -0.172873623201678 A334 -K347 -0.175046117667966 A328 -A334 -0.187499507612684 L341 -L349 -0.188453647157438 A344 -R351 -0.191823826716643 I333 -G339 -0.193693765495417 I333 -T338 -0.19592855808499 T338 -A344 -0.197563147382429 G332 -T338 -0.204470299267238 S325 -G330 -0.212658380732448 G332 -V337 -0.221356269725965 G335 -S340 -0.223375128894662 S325 -T331 -0.227266568342548 T338 -S348 -0.238807979276702 A320 -A326 -0.238997048823898 T331 -V337 -0.241861732326765 L341 -S348 -0.242141731222761 A326 -G332 -0.248539926364288 W322 -L327 -0.251209545301182 L341 -L350 -0.254032143989106 S345 -L350 -0.259258031304139 V337 -L350 -0.259924818046761 A329 -G335 -0.265235027816627 A329 -G336 -0.266749505574265 L323 -A328 -0.271225754079452 A334 -L349 -0.275139135494094 T338 -S345 -0.283435935650529 V337 -L343 -0.294532535416841 S342 -K347 -0.304028022494621 L323 -G330 -0.328634477085593 T338 -L349 -0.334693445908007 G335 -L341 -0.34210696292727 T331 -G336 -0.343717733841025 I319 -A326 -0.344345741355651 I321 -A326 -0.349233992303798 A334 -G339 -0.36392505846772 A329 -A334 -0.393076154084845 G330 -G335 -0.40697836988439 I321 -L327 -0.418027359956573 V324 -A329 -0.451483589530842 A328 -I333 -0.46598848248165 S346 -R351 -0.469483010988965 I319 -V324 -0.48108277714666 S340 -S346 -0.499681481642125 A320 -S325 -0.521535018650261 S340 -S345 -0.559194372856946 S342 -R351 -0.575798657084978