[Mon Aug 29 17:36:51 2016] >Input file: TMQ0R5Q9S1G.pdb >TM segments: 401-415 MAIDEN score = -0.5340 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H410 -Q415 0.329150349311103 S407 -V413 0.100954033866052 S407 -Q415 0.0487021720219341 T409 -L414 -0.00857814824010106 I406 -V411 -0.0480561186849542 N408 -Q415 -0.0512052966191234 I406 -S412 -0.0834888112633825 S407 -S412 -0.141072589327203 S407 -L414 -0.160380639365417 N408 -L414 -0.163122841983721 T409 -Q415 -0.164242308812305 N408 -V413 -0.192635715719259