[Fri Aug 26 18:04:55 2016] >Input file: TMQ144M5M2D.pdb >TM segments: 141-152 MAIDEN score = -1.2870 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S142 -W149 0.139801230507513 D145 -S151 0.124106599431383 V146 -A152 0.11941875580635 D144 -S151 0.0756473066723657 N141 -V148 0.0510139267733505 S142 -Q150 0.0376655952134701 H143 -Q150 0.0239279378277314 H143 -V148 0.0158798807881801 N141 -V146 -0.0253104380566898 D144 -W149 -0.0318763205538561 D144 -Q150 -0.0474214827392623 A147 -A152 -0.0762328157775602 D145 -Q150 -0.0871524571604887 H143 -W149 -0.100471861533302 N141 -A147 -0.135942610728623 S142 -A147 -0.137995807658829 D145 -A152 -0.162005643318435 N141 -Q150 -0.171814492738318 N141 -W149 -0.2565164755001 V146 -S151 -0.317278333813073 S142 -V148 -0.32439357026833