[Fri Aug 26 16:39:28 2016] >Input file: TMQ1A261S2D.pdb >TM segments: 561-601 MAIDEN score = -16.3798 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q568 -L573 0.507931493327916 I590 -R596 0.491397079335133 Q569 -E577 0.320954982558424 K591 -A599 0.319321086437923 H581 -G589 0.304192188748597 N571 -I576 0.266536649609861 S586 -Q594 0.234378284675704 Q580 -L585 0.22399938661907 R574 -Q579 0.195794159500662 L583 -K591 0.180412902360777 Q569 -R574 0.174720948133653 E577 -L583 0.144363593421118 L562 -Q567 0.132991892793846 Q567 -L572 0.132554193904638 Q567 -A575 0.124960610640223 V587 -A595 0.122515054703187 L562 -S570 0.0994639485778759 Q567 -R574 0.0991147398494467 V566 -A575 0.0970421604690461 S570 -Q579 0.0886109092186902 W588 -R596 0.0884976375621411 A578 -S586 0.088263364003224 S586 -A595 0.0698769120498035 V566 -R574 0.0626392421427568 H581 -I590 0.05954966983792 S563 -N571 0.0594768233826682 A575 -Q580 0.0588138675985777 Q592 -V600 0.0582319215686713 Q592 -V597 0.0530012547555119 I565 -S570 0.0526235948706901 L585 -Q594 0.0517863097749141 S563 -S570 0.0466450856256286 Q579 -V587 0.0437250478248608 Q594 -E601 0.0433901136272801 A578 -V587 0.0423858010807292 Q580 -G589 0.0359406560293554 Q592 -A599 0.0338120694413178 L561 -Q569 0.0332460555627216 E577 -Q584 0.0306092643798728 G564 -L572 0.0295212887953227 G564 -N571 0.0216434409926705 R596 -E601 0.0215654583279257 Q594 -A599 0.0178541431625314 A578 -L585 0.0157794655855499 S570 -A578 0.0155222505041137 L573 -H581 0.0130690665961106 L573 -L582 0.0127417413459643 E577 -L585 0.0097748710910539 L582 -V587 0.00110929690673878 S563 -L572 -0.00299607226860954 Q568 -I576 -0.00341923127678667 E577 -S586 -0.00890700602085334 I576 -Q584 -0.0232931933340043 L572 -Q580 -0.0242110278500185 L593 -E601 -0.0275795421887621 Q584 -K591 -0.027995118824597 Q592 -E601 -0.02994266656949 Q580 -S586 -0.0310480036659785 Q568 -E577 -0.0318443640427646 V587 -Q592 -0.0372843860202905 A575 -H581 -0.0397219895948773 K591 -R596 -0.0454754882177033 Q584 -Q592 -0.0490179935153394 N571 -Q579 -0.054099011257597 S586 -Q592 -0.0559888558526507 N571 -A578 -0.0566099957320374 V566 -N571 -0.0613969391366471 K591 -V600 -0.0629682313199433 L583 -Q592 -0.0631896386825446 Q579 -Q584 -0.066337781623362 Q580 -W588 -0.0668322440004264 S570 -E577 -0.0696205121233253 L585 -K591 -0.0697628992675225 S586 -K591 -0.0710575491694869 Q584 -L593 -0.0715833253225147 S563 -Q569 -0.0787780457633744 G589 -L598 -0.0808261826834897 A575 -Q584 -0.0831830349028122 L585 -I590 -0.0894711832448571 I576 -L585 -0.0960107690267815 Q569 -A578 -0.100510405302751 A575 -L583 -0.102316229624896 W588 -L593 -0.103017647170354 E577 -L582 -0.105242710826932 G564 -L573 -0.105851097754917 Q579 -S586 -0.106320237094227 I565 -R574 -0.106788764602665 W588 -Q594 -0.107092416955213 G589 -A595 -0.10802109391789 Q579 -W588 -0.110076796541899 L562 -N571 -0.110646831790155 L562 -Q569 -0.114357869390707 N571 -E577 -0.116937916593505 I590 -A599 -0.120025754026907 R574 -L582 -0.121674835871558 L561 -S570 -0.122425032739494 H581 -W588 -0.122669934456026 L572 -E577 -0.125050313880266 Q568 -A575 -0.125261032801949 Q567 -I576 -0.126511489279322 G589 -V597 -0.127376089300813 Q568 -R574 -0.129977428070222 L585 -Q592 -0.132621656841137 A595 -E601 -0.134254018182458 Q584 -I590 -0.139411810709156 I590 -L598 -0.140248980310275 I565 -L573 -0.145184223586156 N571 -Q580 -0.145787339400276 R574 -L583 -0.147364773886842 G564 -S570 -0.148391704802611 W588 -A595 -0.148909365138708 R574 -Q580 -0.149754672630127 L572 -H581 -0.156905787948846 L582 -I590 -0.157802242138572 V566 -L572 -0.164704570970661 S563 -Q568 -0.168261235398898 I565 -L572 -0.172407894189371 I590 -V597 -0.176413758529521 L582 -G589 -0.176835940046017 K591 -L598 -0.181958740851496 W588 -V597 -0.182912646496051 S570 -I576 -0.183767968799536 L573 -Q580 -0.193065874965148 L582 -K591 -0.193210646887725 G589 -R596 -0.196201087320998 S586 -L593 -0.19986628585915 G564 -Q569 -0.202199008712887 V587 -Q594 -0.205539183892964 L583 -I590 -0.206208893976123 Q569 -A575 -0.212033768402335 L561 -Q568 -0.217040667182394 H581 -V587 -0.219085867631447 A578 -Q584 -0.226075621923925 L585 -L593 -0.226963057206445 Q569 -I576 -0.231978448578134 K591 -V597 -0.232016730193243 A575 -L582 -0.235054052650506 L583 -W588 -0.242443718464703 R574 -H581 -0.24748356149835 L573 -A578 -0.247889435015287 Q580 -V587 -0.250934975974636 L582 -W588 -0.256529705961468 V566 -L573 -0.264989302791394 G589 -Q594 -0.274570341367899 V587 -R596 -0.275429576246636 L572 -Q579 -0.277921677681737 I576 -H581 -0.278005591413085 I565 -N571 -0.284701976116746 L593 -V600 -0.290624260363613 L593 -L598 -0.292531486985387 A578 -L583 -0.293262787126427 L562 -Q568 -0.293690757911091 S570 -A575 -0.298479876034976 Q584 -G589 -0.299728232500475 H581 -S586 -0.303465260380974 L593 -A599 -0.314207029908241 L572 -A578 -0.31799299782754 L583 -G589 -0.330108054640518 V587 -L593 -0.36190284670006 I590 -A595 -0.365088789748068 I576 -L583 -0.386003910084157 I576 -L582 -0.397324605947629 Q594 -V600 -0.421844318497719 L561 -V566 -0.447993391022743 A595 -V600 -0.465629458914298 Q579 -L585 -0.496938251105588 L561 -Q567 -0.516258613866609 Q567 -L573 -0.522319609335296 L573 -Q579 -0.523026693807219 Q592 -L598 -0.523791077759657