[Mon Aug 29 17:14:09 2016] >Input file: TMQ21281S3G.pdb >TM segments: A474-483_A486-497_A500-515_A588-601 MAIDEN score = 0.8305 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V477A-L492A 1.34578606067565 Q481A-H488A 1.27351429257769 V480A-H488A 1.12447510771208 V480A-F490A 0.966874448784985 V477A-D493A 0.847412380517109 S483A-L514A 0.762379389436446 V480A-I486A 0.756344763532114 S483A-T515A 0.745420384993776 S478A-L492A 0.723086404037022 V479A-F490A 0.649068967212744 R476A-S496A 0.599395626533844 R476A-L492A 0.5555953825533 V477A-Y495A 0.539763030016299 F490A-A504A 0.533583424836882 Y495A-L501A 0.52967855416764 S496A-L501A 0.503157991328737 S483A-L511A 0.485039194944624 V477A-G491A 0.451838926923395 I588A-R594A 0.416515457960312 Y482A-L514A 0.385903007734709 V479A-R487A 0.362375150626091 S483A-H488A 0.328270342664293 L501A-R506A 0.320062566854621 S478A-F490A 0.319748241178279 R476A-L501A 0.31571317471621 R476A-Y495A 0.3105787299391 S496A-A504A 0.30164865234861 E489A-Q502A 0.296989765177024 V479A-D493A 0.291277736748297 V479A-I505A 0.291264585191957 H488A-N494A 0.276588226689436 S500A-N507A 0.263260452183359 V477A-L501A 0.255827074276851 Q481A-G491A 0.192194903775029 G491A-S496A 0.189359713582023 R476A-D493A 0.18932560122597 H488A-E509A 0.185733707209349 D497A-N503A 0.184187560942671 V479A-L501A 0.180763992603834 Q481A-E509A 0.179354179026284 D497A-R506A 0.175046885219126 T475A-G491A 0.165242908018867 Y482A-F490A 0.162879181271981 Y482A-E509A 0.160737371323581 R476A-S500A 0.15656340226175 Q502A-N507A 0.15566289279693 V480A-I508A 0.1487148797692 Q481A-A504A 0.145835116129465 T475A-L501A 0.143352938282574 S496A-N503A 0.143030484179158 S589A-R594A 0.142327622823361 V479A-H488A 0.138174732515843 V479A-G491A 0.136610142334479 S478A-E489A 0.136430561794625 Q481A-G513A 0.134859285895047 V479A-S500A 0.130528346053172 I505A-Y510A 0.130293621493007 S589A-H597A 0.128421655972173 D493A-S500A 0.124753869231438 N503A-E509A 0.123983918667818 N494A-N507A 0.122604346336583 V479A-R506A 0.116522821127672 N494A-R506A 0.113829667380938 R487A-N494A 0.113829667380938 F490A-Q502A 0.112628415764009 Q481A-I508A 0.111211909951941 E489A-Y495A 0.108505259500925 K474A-S500A 0.10432772538959 G491A-A504A 0.102137584205017 V480A-L511A 0.101965076355665 I486A-I508A 0.0953894992485123 K474A-D497A 0.0952117365013025 H488A-I505A 0.0913674112768457 H488A-I508A 0.0900583593562239 S478A-R487A 0.0894913189853135 R487A-G513A 0.086434288930171 E489A-A504A 0.0821631093035067 V480A-L501A 0.0813221152331214 T475A-S500A 0.0811658714773788 V479A-Y495A 0.0808342993792799 S483A-Y510A 0.0789147014371228 R476A-A504A 0.0747980441475038 I486A-G513A 0.0734738842002045 D497A-A504A 0.0709560077411719 R487A-L514A 0.0707961094741978 V480A-N494A 0.0702287076753695 V477A-E489A 0.0688146579339524 R487A-T515A 0.0663134787283626 V479A-N507A 0.0659428833767866 R476A-N503A 0.0635484294513216 T475A-L492A 0.0626804940739145 T475A-F490A 0.0607512691651593 R487A-T512A 0.0592816644738555 G491A-N507A 0.0584834762828356 F490A-N507A 0.0567321221992943 G491A-I505A 0.0548937926811182 S478A-D497A 0.0537888929921027 T515A-I588A 0.0532800768605935 V480A-R506A 0.053014094535202 N494A-N503A 0.0467144284887059 S589A-T595A 0.0457989751408654 G491A-S500A 0.0420160774229086 S478A-S500A 0.0410376426638175 N494A-L501A 0.0403294395491693 S591A-H597A 0.040087866825155 V480A-D493A 0.0384706689837193 N494A-I505A 0.037810071961401 H488A-A504A 0.0364093135946479 R487A-E509A 0.0344753598920717 T475A-Q502A 0.0334533129286618 S478A-I505A 0.0333065638759731 Q481A-R506A 0.0325770082838543 S483A-I508A 0.0283021468743461 V480A-L514A 0.0272183046912897 L492A-S500A 0.0269269961707414 V480A-N507A 0.0254949881702875 H488A-R506A 0.0249207336983951 E489A-N507A 0.0242876798943756 Y482A-T512A 0.0240219289595783 I588A-H597A 0.0233575990714012 R476A-H488A 0.021076876327252 S478A-N503A 0.0151650146957734 F490A-N503A 0.0143690033879955 R506A-L511A 0.0132872105690494 V479A-L511A 0.0132841007282662 V477A-H488A 0.0130067530228639 Y510A-T515A 0.0127870270498893 S478A-I486A 0.0125181937890844 Q502A-I508A 0.0124197569391504 I486A-E509A 0.011755776098278 V477A-F490A 0.0109618283922384 F490A-I508A 0.00988404387308228 L492A-I505A 0.00862374054287685 R476A-G491A 0.00292102415247486 R487A-N507A 0.00204382541176873 V480A-A504A -0.000142172185592981 T475A-S496A -0.000151783900261382 I486A-T515A -0.00128151961935741 V480A-E509A -0.00399647959725158 I486A-G491A -0.00512310685015294 I588A-T595A -0.00951875132504565 Y482A-G513A -0.00982873736022083 F490A-R506A -0.0106899730250868 E489A-L511A -0.0110918051786329 Q481A-Y510A -0.0121512351575883 S478A-N507A -0.01568443557619 V480A-Y495A -0.0166492506045326 Q481A-T515A -0.0177547540603661 H488A-Y495A -0.0190058691900843 R487A-Y510A -0.0202682908950114 V480A-T512A -0.0203544165915339 E489A-R506A -0.0205532093756344 I486A-Y510A -0.0211443419014299 R487A-I508A -0.0213987213259786 F490A-D497A -0.0224073830656035 Q481A-N507A -0.0228180669453761 K474A-G491A -0.0244089572620401 K474A-N494A -0.0266947836377431 N494A-Q502A -0.0276874986168705 V479A-E489A -0.0280499159014367 Y482A-I505A -0.0289422001679194 F490A-L501A -0.0320117760852856 E489A-L501A -0.0361997925053315 Y495A-I505A -0.037400789963705 L492A-D497A -0.040178593189082 V477A-S496A -0.0421659095140086 R487A-I505A -0.0424079156616317 E489A-Y510A -0.0433247189394299 K474A-Y495A -0.0437462583764203 Q481A-F490A -0.0439616802424496 V480A-Q502A -0.0448908426500245 G590A-F596A -0.0450963942464258 Q481A-L492A -0.0460503873145992 V479A-A504A -0.0463433080443769 R476A-F490A -0.0473360265328875 E489A-N503A -0.0521084779014893 S478A-D493A -0.0523917374050347 A504A-E509A -0.0553533737042615 D493A-I505A -0.0556269420896989 Y495A-N507A -0.05612806374041 F490A-S496A -0.0577452034777732 S483A-E509A -0.058220322895018 Q481A-L514A -0.0591245149920114 R476A-Q502A -0.0592764534850732 I588A-F596A -0.0599283664185131 Q481A-L501A -0.0626048139880275 V479A-N503A -0.0634008005264663 G491A-D497A -0.0650171176980168 V480A-Y510A -0.0667246791750937 R476A-E489A -0.0668255850774595 L492A-Q502A -0.0684189326893237 F596A-F601A -0.0690699704671462 G491A-N503A -0.0707113579005885 V480A-T515A -0.0730245858268508 A504A-Y510A -0.0743027930546354 V477A-N503A -0.0743593589818001 T475A-N494A -0.075090403805548 S478A-R506A -0.0751990079881206 H488A-L511A -0.0758883074396506 S478A-S496A -0.0760657624525245 S500A-R506A -0.0780844238363828 D493A-Q502A -0.079440533019606 E489A-S500A -0.082274655919178 D493A-A504A -0.0847081601126027 Y495A-R506A -0.0848018103621513 I505A-L511A -0.0854118001747235 S500A-I508A -0.0882204237392035 S478A-I508A -0.0906827872109526 S496A-I505A -0.0923129599528298 V480A-L492A -0.0933007719394414 S589A-F596A -0.0960443433828823 G491A-Q502A -0.0984751596527984 S483A-E489A -0.0994643976017999 G491A-L501A -0.0996396251579206 I508A-G513A -0.103658477424496 L492A-N503A -0.104024764572895 T475A-Y495A -0.106984195922282 L492A-A504A -0.107171108991471 V479A-S496A -0.108976933044346 V480A-E489A -0.109698122165621 H488A-T515A -0.109931695676332 T475A-D497A -0.112333462789016 E489A-I505A -0.114357853226249 V479A-N494A -0.115163380899474 S478A-N494A -0.117788275779813 R476A-I505A -0.120596929331529 K474A-Q502A -0.12207141596549 K474A-S496A -0.123612557891621 D497A-I505A -0.124133822676729 L501A-I508A -0.124319833563706 S478A-Y495A -0.133308392226747 D497A-Q502A -0.133833593619916 I588A-D593A -0.135697212015448 I486A-T512A -0.138819861619774 V479A-I508A -0.139587906706159 F490A-I505A -0.142224077800599 S478A-Q502A -0.147613807467796 S483A-T512A -0.14765378979062 S591A-F596A -0.148033030537059 V477A-N494A -0.149354279772097 I486A-L511A -0.149524837324959 V479A-E509A -0.150620405045552 V477A-A504A -0.151966026842917 R487A-L492A -0.152772976305633 S496A-Q502A -0.153265337764241 H488A-N507A -0.155060582648919 K474A-D493A -0.160955345548886 Y482A-L511A -0.161940758051826 V479A-Q502A -0.162295525374891 K592A-H597A -0.165093235800829 F490A-Y495A -0.167168120279069 V477A-R506A -0.167397438124449 F490A-S500A -0.167418643147911 S500A-I505A -0.167475883240751 V477A-I505A -0.171864742421679 V480A-I505A -0.175958044843621 K474A-L501A -0.178332057039948 R487A-L511A -0.18061275582845 Q481A-I486A -0.181167037282672 R476A-D497A -0.186279033630119 V479A-I486A -0.187099549970499 F490A-E509A -0.189285058659495 Y482A-E489A -0.192405359429831 R487A-A504A -0.192817750590196 E489A-N494A -0.195000329701408 K474A-L492A -0.199309361509908 N494A-S500A -0.200825697960978 Y482A-I508A -0.205559802360589 N494A-A504A -0.208501212160277 Y495A-S500A -0.208763037037756 E489A-E509A -0.216169842543228 Q481A-T512A -0.219694969325321 T475A-D493A -0.225464545990506 E489A-I508A -0.226855194238574 S478A-A504A -0.227731420193596 Y482A-T515A -0.231388058669538 V480A-G491A -0.236656361597927 L501A-N507A -0.245502455214165 H488A-L501A -0.253051417365643 S478A-H488A -0.253513991423569 D493A-L501A -0.256074427126922 Q481A-I505A -0.260640158862851 N503A-I508A -0.269633569991778 V479A-D497A -0.271481980483574 Y482A-Y510A -0.272844725411108 H488A-D493A -0.275236942662259 D593A-V598A -0.278517164336022 V479A-L492A -0.281041247221662 I486A-L514A -0.290011123019728 G590A-T595A -0.292723733026094 S478A-L501A -0.29344246293816 Q481A-L511A -0.297130296472995 V477A-D497A -0.299406392992113 Y495A-A504A -0.321985661174685 V477A-S500A -0.332859324787147 R476A-N494A -0.340443131906453 Q481A-E489A -0.389535611244982 Y482A-H488A -0.394554899181479 Y495A-Q502A -0.433751046644537 V477A-Q502A -0.457334076989888 L492A-L501A -0.458352329446077 Y495A-N503A -0.475614357432121 S483A-G513A -0.603933215045378 S478A-G491A -0.646214420673919 Y482A-R487A -0.6659391421466 V480A-R487A -0.749688329799348 Q481A-R487A -0.904661771176822