[Mon Aug 29 17:41:43 2016] >Input file: TMQ28FA9M1G.pdb >TM segments: 149-194 MAIDEN score = -3.6298 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I157 -V164 1.02213046900049 R165 -P170 0.823046809288798 L156 -L163 0.76055110131837 F160 -G166 0.618234353329734 L156 -E161 0.616903154062925 L156 -V164 0.529643414773145 Y180 -L186 0.491340832438116 P181 -L186 0.437249627939511 W168 -N173 0.386255990819068 L163 -P170 0.37031461576972 G155 -Q162 0.367561323208829 Y180 -V190 0.356553334044231 Y180 -G188 0.352973894986627 Y180 -T185 0.299056838024914 L156 -R165 0.297346680819515 Q162 -P170 0.295190608623906 V167 -S172 0.281922283960806 K169 -S179 0.270771087740084 I157 -R165 0.254015279898034 S158 -P170 0.192893137074832 V164 -P170 0.182365512057764 G153 -L163 0.177857617093988 L156 -P170 0.170668908494193 G153 -Q162 0.170172260933383 G154 -V164 0.16979752165922 S172 -Y180 0.166973635006743 P170 -K177 0.161376300140509 L163 -N173 0.158684019003435 K169 -L176 0.147145810249846 I157 -L163 0.143163104504091 R165 -E171 0.140544931765139 R165 -F175 0.135286651279484 E161 -N173 0.12930301334854 E174 -S179 0.128662158716089 P181 -V190 0.122625366150081 L176 -P181 0.122388669388203 T185 -F192 0.117969410337099 S179 -A189 0.116420233216329 S179 -L186 0.107302197749046 G154 -R165 0.107097063393506 L186 -L194 0.10690527714761 E174 -Y180 0.104954893784337 Y180 -A189 0.10328177659679 P181 -G188 0.101782149787109 G153 -V164 0.0999349481250562 G155 -E161 0.0960119172455585 E171 -L176 0.0909414261929811 V164 -N173 0.0879056976549702 L156 -V167 0.0859423002643798 W168 -F175 0.0844544970325991 L176 -V182 0.0820641939588278 P170 -M178 0.0792979626817258 K183 -G188 0.0761891588710384 V182 -A189 0.0753967395174748 G155 -G166 0.0726809939152533 A152 -L163 0.0690420770904261 G155 -V167 0.0688200787514268 N173 -Y180 0.0640448353647507 S158 -G166 0.0594987024710476 E171 -S179 0.0587655086259735 V164 -E171 0.0583431967532881 G153 -E161 0.0567592364105063 N159 -E171 0.0567196159909931 R165 -E174 0.0560853041310407 G155 -L163 0.0545055033056823 F160 -R165 0.0522342020829942 I157 -G166 0.0498006738280012 A152 -N159 0.0488698643810377 L163 -S172 0.0484084567414218 G154 -G166 0.0476623456827405 G166 -L176 0.0466779049398518 S179 -T185 0.0443717602814124 S172 -S179 0.0407329170965363 K183 -T193 0.0403230056748386 G151 -I157 0.0394721974389536 M178 -T185 0.0381050620857109 V164 -S172 0.0358997493453637 V167 -L176 0.0352185280061592 M178 -L186 0.0344050597031664 L156 -W168 0.0295210517642621 V167 -E174 0.0293241830441491 G166 -S172 0.0292670789208826 V182 -L191 0.0267361536137731 F160 -K169 0.0260972957608852 P181 -A189 0.024997988065727 K169 -E174 0.0226184865098844 I157 -V167 0.0192331195171338 K183 -L191 0.0158626419483436 G155 -V164 0.0136672798174171 A152 -I157 0.0101402676040436 G151 -L156 0.0098172233407694 V182 -V190 0.000845661686122767 V164 -E174 -0.000203710386109002 K183 -A189 -0.00980187302454816 Q162 -K169 -0.0113247751320831 G166 -F175 -0.0127149371939215 G151 -S158 -0.0145779111207768 S158 -V164 -0.0182305899616209 V167 -F175 -0.0212480843491289 Q162 -S172 -0.0217814300089768 L163 -W168 -0.022569239478468 S158 -R165 -0.0244304082807876 V184 -F192 -0.024789825627755 N159 -P170 -0.0256078970237494 A152 -F160 -0.0336627916286352 G153 -N159 -0.0415967574351903 A152 -Q162 -0.0442308015442636 L156 -Q162 -0.0465616470929699 F160 -S172 -0.0490606955497888 A152 -V164 -0.0526831051892822 E161 -V167 -0.0581265590291737 N159 -V167 -0.060106672150237 K169 -F175 -0.0691039038690219 Q162 -N173 -0.0732102738544513 R165 -L176 -0.07651602165895 I157 -P170 -0.0773535338301015 G155 -F160 -0.077411506817068 F160 -W168 -0.0788563734497982 Q162 -E171 -0.0848367314082814 F175 -Y180 -0.086415704378433 V167 -N173 -0.0883274897597217 F175 -P181 -0.0885746601793276 Y180 -I187 -0.0888391756508824 G154 -V167 -0.0890150013123305 T185 -L194 -0.0964193118740184 E161 -S172 -0.100499344289681 W168 -K177 -0.102263730059881 E161 -W168 -0.10539134746526 E161 -K169 -0.105681841162699 R165 -S172 -0.105929481826911 S158 -V167 -0.107382687199171 E161 -E171 -0.10760890835328 L163 -E171 -0.108751919406556 S179 -V184 -0.109617838758457 S172 -K177 -0.110312260486638 K177 -V182 -0.110411076135044 G166 -E174 -0.112486344020509 N159 -G166 -0.119668885840484 R150 -L156 -0.121003427104504 A189 -L194 -0.123726348570223 E171 -M178 -0.126397206956801 F160 -P170 -0.12642271878645 V182 -G188 -0.127073760447329 G154 -Q162 -0.127656162494667 Q162 -W168 -0.13400843608205 N173 -M178 -0.134392269061408 G154 -N159 -0.136480914767293 E161 -P170 -0.137335576877335 G153 -F160 -0.139201693279102 P170 -S179 -0.141290711713496 V184 -T193 -0.146947442258561 R150 -G155 -0.151751171575216 I187 -F192 -0.157545552200553 L156 -G166 -0.157923085162024 W168 -E174 -0.158959873110614 N159 -V164 -0.160141594862222 K169 -M178 -0.163004061914079 L156 -E171 -0.166050036499873 K169 -K177 -0.176389774342232 G155 -R165 -0.177966760238876 G166 -N173 -0.178754644669707 V184 -L191 -0.187590732710939 L186 -F192 -0.190057752148216 S172 -M178 -0.192222143352174 G153 -S158 -0.193804616350694 S158 -L163 -0.194439966430274 K183 -V190 -0.195096835950886 L163 -K169 -0.201386108224075 E171 -K177 -0.209695671332635 A152 -S158 -0.210555569956824 G154 -E161 -0.219904311122779 R165 -K177 -0.2237921762336 P170 -F175 -0.226094537952173 T185 -L191 -0.22784502944226 T185 -T193 -0.231083858751534 T185 -V190 -0.233479223156126 F160 -N173 -0.233597836010101 V164 -K169 -0.236306282082762 P181 -I187 -0.248954429297864 G154 -F160 -0.254530373361793 V182 -I187 -0.269375693483822 E174 -P181 -0.279392998155799 W168 -L176 -0.280024064337436 I157 -Q162 -0.280108255139366 V184 -A189 -0.28332724560185 F160 -V167 -0.286592555647115 L186 -T193 -0.288944911449006 N173 -S179 -0.296044942626471 F160 -E171 -0.296452577874581 G188 -T193 -0.303833573286592 Q162 -V167 -0.305183221682256 G188 -L194 -0.305704671098983 I187 -T193 -0.319475475854402 V184 -V190 -0.32962423040327 L186 -L191 -0.334723032497745 G154 -L163 -0.340754331306723 K183 -F192 -0.356418708868651 R165 -N173 -0.392596675056625 N159 -R165 -0.395425957484466 I187 -L194 -0.417691677581716 E161 -G166 -0.438962549270723 P170 -L176 -0.479302817077759 G166 -E171 -0.505230140898144