[Mon Aug 29 17:47:35 2016] >Input file: TMQ2F7I8S2G.pdb >TM segments: 41-51_ 55-67_ 69-82_ 127-156 MAIDEN score = 22.3306 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C130 -E136 10 N50 -L80 5.89917851381767 T138 -P145 1.26458822032103 N43 -L63 1.18250300241965 Y129 -C135 1.13590042152576 K47 -A59 1.09324796806306 C130 -C135 1.00008276823849 K47 -A57 0.908073525261464 A57 -D76 0.816042284669144 T138 -L154 0.807514132208048 V41 -L63 0.735941824482664 V44 -L63 0.720842405864155 Q55 -L80 0.683725832345367 F42 -L63 0.647515933543115 T138 -S146 0.647507415043592 L62 -P71 0.609808238092518 Q140 -L154 0.609508923605407 A57 -F75 0.6077082485983 G139 -S153 0.573812418632633 V44 -L62 0.568576836544638 N58 -Y74 0.556987830935445 V44 -T69 0.499014550366672 V44 -T65 0.496964448330385 K144 -K155 0.45411502795503 K47 -P71 0.442973306172634 F42 -T65 0.44203017595746 W46 -S61 0.437870146377537 S146 -S153 0.426045898522652 T49 -L80 0.414094283200733 T138 -I152 0.41100002921657 A59 -L73 0.402004584425603 I48 -T56 0.396497997250636 I48 -A59 0.396121133254663 T60 -L73 0.394873915255359 I48 -F75 0.384497969984396 L51 -L80 0.383964967044752 P145 -K155 0.372635766478986 L63 -T69 0.362465495127367 V44 -M66 0.360025143621275 W46 -N58 0.359373423928098 G139 -K144 0.34916168852773 T138 -S147 0.345945454791604 N58 -P71 0.331358547338569 C78 -K155 0.32809707521144 T137 -D150 0.317014382013679 W133 -P145 0.312042225243125 G134 -G139 0.304149752976566 W46 -T60 0.301649576627705 N43 -P71 0.300157943091234 W46 -T65 0.28489121733864 W46 -F70 0.282314780199075 V44 -G64 0.281495219644093 T45 -A59 0.279064545751521 N58 -K72 0.276210484416114 T49 -C78 0.268523816325925 C78 -R156 0.268153943323227 W133 -T138 0.266869443618647 T56 -D79 0.2659118546054 W46 -L73 0.260626784900921 N50 -V81 0.260495973673112 T138 -K144 0.260033873207546 T56 -C78 0.254042909317808 G139 -R156 0.252579889501711 T137 -S153 0.249817353485835 E136 -K144 0.237600057154578 G134 -W143 0.233529979524929 T49 -L77 0.231916278192478 L51 -G128 0.230673749096245 C130 -T138 0.228911766921835 K47 -L73 0.223299033044595 L62 -T69 0.222391502715894 Y129 -E136 0.220605440350959 K144 -R156 0.220303584739544 N43 -G64 0.219966386022231 Q55 -F75 0.217219456426156 T137 -W143 0.216411515081914 P71 -S153 0.214005569089449 K47 -D76 0.210433734466938 N58 -L73 0.20140779517136 I48 -A57 0.201237983858323 A59 -Y74 0.20088519815509 P71 -L151 0.193421667450979 V41 -T65 0.193327363250902 K72 -R156 0.191983631358395 T138 -W149 0.191419924316112 A141 -S153 0.188014721408142 T45 -L62 0.186930426578767 C135 -W143 0.186747158492361 Q55 -C78 0.185870563889993 T49 -D76 0.185339165122326 L51 -N58 0.182942534469453 K47 -D79 0.180535687663759 G139 -P145 0.17688163829796 T56 -G82 0.17583127309201 W46 -Y74 0.171952391068799 D79 -R156 0.170660871185244 G139 -L151 0.17051523747759 T45 -T67 0.169913210397223 Y74 -D79 0.169025765031479 E136 -Y142 0.167141636444093 F42 -T67 0.165905898481202 T60 -P71 0.165750971887475 N58 -C78 0.162601722578469 W133 -K144 0.160062872853993 D150 -K155 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