[Fri Aug 26 17:05:31 2016] >Input file: TMQ69ZZ6M1D.pdb >TM segments: 501-530 MAIDEN score = -3.3546 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C501 -E506 0.716756657946805 L511 -Q516 0.542741233578221 E505 -T512 0.399035271334284 R503 -L508 0.396826481003232 R503 -D510 0.35251032250689 E505 -D510 0.322404752144515 H515 -K523 0.280578585920051 C501 -N509 0.278911796988367 N521 -M529 0.275323998760386 L508 -H515 0.262415492926715 N521 -S528 0.258801544530476 K523 -E530 0.233431190581598 Q507 -Q516 0.21774865092473 N509 -E518 0.207213847720164 H515 -L522 0.182678014487405 N517 -Q524 0.138720896688848 D510 -N517 0.135418910396909 E502 -N509 0.130639537927532 Q516 -N521 0.125753437632099 N521 -E530 0.124187767663996 C501 -Q507 0.12399806814011 N509 -Q516 0.118377863807749 E502 -D510 0.103606848112231 E506 -H515 0.0974165061155614 T512 -N521 0.0842248655403903 E505 -E513 0.08192214697055 N517 -L522 0.0779133520972772 D510 -E518 0.0698152338018123 L511 -N517 0.0612112994629577 L504 -T512 0.059050236995108 N509 -L514 0.0567386217252301 N517 -K523 0.0558721821257953 Q507 -H515 0.0554955873181862 Q516 -K523 0.0534034772054595 I519 -A527 0.047368878966779 R503 -L511 0.0471847175081503 L522 -M529 0.0452223131340554 L520 -S528 0.0385451938501384 D510 -H515 0.0328130531536228 R503 -T512 0.0325853212946885 E518 -L526 0.0311846392295405 L504 -N509 0.0293821471922904 N521 -L526 0.020623210123792 L514 -L522 0.0192369526870815 N517 -A527 0.0189574950602838 L508 -Q516 0.0171577369688141 N509 -N517 0.0159309180134578 L522 -E530 0.0143130964637255 L511 -E518 -0.0167198375298581 E518 -K523 -0.0204771160325898 Q516 -E525 -0.0214460969226513 E513 -N521 -0.0293988749184348 N509 -H515 -0.0402259457984924 L504 -L511 -0.0413662097338587 T512 -N517 -0.0428625168124572 H515 -N521 -0.0456293563333796 D510 -Q516 -0.0500664990830695 I519 -L526 -0.0500676019982061 E506 -L514 -0.0514629603869352 L514 -Q524 -0.0562970334600297 D510 -I519 -0.0583589003934246 C501 -L508 -0.0609452963146975 N517 -E525 -0.0676385410069607 L520 -E525 -0.0678643211862546 N517 -L526 -0.0686693007879091 Q507 -E513 -0.0766748971081448 E518 -A527 -0.0899340596192693 K523 -M529 -0.0901336164641426 L520 -M529 -0.0936134653139524 T512 -L520 -0.0952100860680263 E513 -E518 -0.103697534957027 E506 -T512 -0.107322072552019 Q507 -T512 -0.109357461837668 L508 -E513 -0.114254758552308 Q524 -E530 -0.114600997292577 E525 -E530 -0.121027462196256 E518 -Q524 -0.122729516970036 E505 -L511 -0.123877397945513 L511 -L520 -0.125211653526836 E506 -L511 -0.129891317532543 L514 -K523 -0.131200568452459 L514 -N521 -0.137164585326077 E502 -L511 -0.138851604175134 R503 -N509 -0.148527684636462 E513 -L520 -0.153225237104794 T512 -E518 -0.155323244648677 K523 -S528 -0.156971439206355 L504 -E513 -0.157475902942747 E505 -L514 -0.158920112259323 L511 -I519 -0.160417170047012 E513 -L522 -0.161443827149444 L520 -E530 -0.163330896389731 Q516 -Q524 -0.170756538034169 E513 -I519 -0.173791660670881 L508 -N517 -0.18215808971417 L522 -A527 -0.185097657935964 Q507 -L514 -0.187451375838836 E502 -L508 -0.193292089809934 I519 -E525 -0.194139201091283 E502 -Q507 -0.195711315221334 E518 -E525 -0.21005401812287 E506 -E513 -0.212420759209114 I519 -Q524 -0.213742016993914 L520 -A527 -0.219581425821938 L522 -S528 -0.220816221528313 L508 -L514 -0.223025088482929 N521 -A527 -0.224904290425449 T512 -I519 -0.23868685370003 L504 -D510 -0.239259189919071 L514 -L520 -0.276790776548907 C501 -D510 -0.298408942202178 H515 -Q524 -0.320286012772449 Q516 -L522 -0.344262638958112 L514 -I519 -0.350394867992238 H515 -L520 -0.357553005063053 Q524 -M529 -0.38005184021459 L520 -L526 -0.40375852490359