[Fri Aug 26 17:13:03 2016] >Input file: TMQ6EUQ1M1D.pdb >TM segments: 97-112_ 127-134 MAIDEN score = 1.0245 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F106 -V129 0.856263517069166 F106 -L131 0.687203815569832 F106 -T130 0.57232095448733 F106 -P128 0.568952400926102 T107 -L131 0.428399273288636 T107 -T130 0.387346992347096 T110 -T130 0.316281170869321 G104 -H133 0.306017356378364 T107 -V129 0.25709501503227 L103 -T111 0.235848702667259 G104 -Q132 0.233531165053437 T107 -H133 0.19724452517535 L103 -P128 0.180890425287902 N105 -L127 0.159464991860387 L103 -S108 0.158915633021181 T111 -T130 0.154965993171724 T107 -I112 0.139784791634322 N105 -T130 0.125860206754352 G104 -I112 0.124729671075234 S108 -P128 0.122265604449058 S102 -T111 0.12089539036694 L103 -Q132 0.118099700308705 S102 -T107 0.102234715952853 G104 -P128 0.0994140242562054 G104 -T110 0.0877653736351265 S102 -T110 0.0830178985128475 S102 -T130 0.081355608797287 G104 -L127 0.0802222498798477 G101 -F134 0.0733142381053269 L103 -L127 0.0640175168320636 L103 -H133 0.0627629607365501 S108 -L127 0.0521760391641839 N105 -L131 0.0455902903024938 L103 -T110 0.0412126439420533 P128 -F134 0.0263037467185714 F106 -I112 0.023961541905515 L103 -I112 0.0225788947150418 F106 -F134 0.0219124365000525 V129 -F134 0.0198262922774437 I112 -L127 0.0160441109973259 S102 -F134 0.0141694472476952 G101 -T111 0.0113770794662986 G101 -F106 0.00951106967287885 S108 -Q132 0.00232654448086023 T110 -V129 0.0014418711313039 T110 -L127 -0.00316468300778361 S102 -L127 -0.00528773354298018 T110 -L131 -0.00564516640448764 S108 -F134 -0.0200066525924458 S108 -T130 -0.0256775349647835 S108 -H133 -0.0310302594428058 N105 -T110 -0.0324512734659257 L103 -F134 -0.034038255043475 G104 -F134 -0.0395934767406505 F106 -Q132 -0.0437360306318525 T107 -F134 -0.0457098484006973 N105 -Q132 -0.0480010489010092 I112 -P128 -0.0621032700452657 N105 -V129 -0.0645837660877984 G104 -I109 -0.0682499180770879 T111 -V129 -0.069758626927281 L127 -Q132 -0.0708900599033702 T111 -P128 -0.0709046098384509 N105 -H133 -0.0711069763167307 L100 -N105 -0.0727490479108748 T107 -P128 -0.076383168186799 S102 -L131 -0.0851020499605095 S102 -I109 -0.0855090538860335 G104 -T130 -0.0867287434022606 I109 -L127 -0.0880736465834689 T110 -P128 -0.0883321365392029 I109 -P128 -0.0990572340319117 S102 -I112 -0.110495281170357 I109 -L131 -0.113853044525198 L103 -V129 -0.117270094226143 G104 -L131 -0.118052849254633 F106 -T111 -0.12015628946696 T111 -L127 -0.120548243213215 S102 -P128 -0.129763734558735 S108 -V129 -0.130125548651295 L103 -I109 -0.141512597090306 N105 -F134 -0.146943050945612 F106 -H133 -0.154368309257483 G104 -T111 -0.155952741168514 I109 -V129 -0.161342731499792 N105 -T111 -0.189034627633334 T107 -Q132 -0.190362581306994 G104 -V129 -0.203562285650241 S108 -L131 -0.249128457604193 F106 -L127 -0.259648845416659 N105 -P128 -0.266286298509004 L103 -T130 -0.279023001611947 L103 -L131 -0.30398377175155 P128 -H133 -0.304516944148213 T107 -L127 -0.305326854804901 N105 -I112 -0.310997251025309 I109 -T130 -0.39428634537689