[Mon Aug 29 17:25:42 2016] >Input file: TMQ6L1Y3M1G.pdb >TM segments: 31-50_ 153-161 MAIDEN score = 5.8804 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I47 -I153 1.20068957364325 I31 -I40 1.17513278131257 F33 -I40 0.957561254968916 I38 -V43 0.82033694154039 L34 -I40 0.81151494503618 S32 -I40 0.722613730445943 I31 -S36 0.68956177312928 F33 -I38 0.613190459165913 S45 -S50 0.598859118385263 S32 -L41 0.556583512448423 S39 -L44 0.502641729739098 F33 -L41 0.487843140456903 F35 -I40 0.474359778564809 V43 -Y49 0.460127408447859 L34 -S39 0.421655232364483 F33 -I42 0.40005841118929 S39 -H154 0.387799132727119 S32 -S39 0.381537360026008 F33 -S39 0.351782445375121 I47 -H154 0.327985529171669 G46 -H154 0.324156003613622 G46 -Y157 0.315915108157538 S39 -G46 0.299873761320332 V43 -Y157 0.270214121360975 S39 -Y156 0.253266986369635 I31 -V43 0.220851046024036 S39 -Y49 0.184285487360729 S45 -Y156 0.177234024854692 R155 -D160 0.175943551342193 S36 -Y156 0.169704096151832 V37 -I42 0.169063189161083 I47 -R155 0.165288836816761 S39 -R155 0.164211346556191 L34 -S45 0.159763962731827 I38 -R155 0.157465629560008 L34 -I42 0.153132295193453 Y49 -H154 0.153038664627331 F33 -V43 0.15170735498906 V43 -H154 0.145449225092325 I42 -V48 0.144604334977832 I31 -S39 0.141399017013438 I31 -I42 0.131693510858251 S36 -V43 0.128862332978367 L34 -L44 0.113992930383949 S39 -I47 0.110526211993604 V43 -I153 0.104539737772759 V37 -L44 0.0986206236506764 L34 -I47 0.0927614225152834 I38 -V48 0.089931523108473 I40 -Y156 0.0867525455273896 L44 -R155 0.0857999592981114 S45 -R155 0.0767478836188893 G46 -R155 0.0759357923371775 F33 -Y49 0.0744341087006717 F33 -H154 0.0735978607067089 L41 -G46 0.0718036678142191 S39 -S50 0.0692713818545574 V43 -V48 0.0684750655726099 V37 -R155 0.0638736260525503 I42 -Y157 0.0631789286262157 I42 -I47 0.0626010625206881 I47 -Y157 0.0623337263357966 V37 -H154 0.0580710526039505 I42 -S50 0.0536682575011883 V48 -R155 0.0531647497999191 I40 -H154 0.0505371222493078 G46 -I153 0.0503621424894707 V37 -Y157 0.0476281394776814 L34 -G46 0.0455164081964679 I38 -Y156 0.0446848583052333 F33 -G46 0.0361863059236045 L34 -L41 0.0334451663605257 S32 -I38 0.0321747039856017 L44 -I153 0.0318991597735714 V48 -H154 0.0301177305124978 S32 -L44 0.029635860128927 L41 -S50 0.026418026553656 I42 -I153 0.0232210133962658 S39 -S45 0.0205254978631673 I38 -G46 0.0163984214726258 S32 -S45 0.0126860137039215 I38 -S45 0.00708968454754366 F35 -S45 -0.00802650905890712 Y49 -R155 -0.0147689660042354 F35 -L41 -0.0224608901007421 I40 -Y49 -0.0260718326540282 S45 -I153 -0.0262379996651321 I42 -R155 -0.0304433358914533 S36 -I42 -0.0322713957777712 I42 -R158 -0.0341791814464631 S39 -I153 -0.0404210745841835 S50 -R155 -0.0453833178833968 S39 -Y157 -0.046748198409519 L44 -Y156 -0.048742759816454 I38 -R158 -0.0507772676761981 Y156 -A161 -0.0552713099293785 F35 -L44 -0.056694700197724 I40 -S50 -0.0578363614832487 L41 -R155 -0.0630591565210625 I38 -H154 -0.0642160153228453 I40 -S45 -0.0703191599737139 L41 -H154 -0.0703619504407049 V37 -I47 -0.0727150921275488 L44 -H154 -0.0752017485774257 F35 -Y156 -0.0773643092625402 G46 -Y156 -0.077680375718618 V48 -Y156 -0.077808357893132 F33 -I47 -0.0793879424601227 I38 -Y49 -0.0796687491174428 L41 -I47 -0.0814633944791825 I47 -Y156 -0.0820805699686549 F35 -R155 -0.0833376925624356 S36 -R155 -0.0845252781092651 L34 -Y157 -0.0878967096064622 L41 -Y49 -0.0987917514635748 S50 -H154 -0.103226442457414 I42 -Y49 -0.111767508047357 I38 -I153 -0.114403666380345 F33 -R155 -0.135033049088561 V48 -I153 -0.1352357070847 I38 -Y157 -0.13751572929565 F33 -R158 -0.139546957873094 I40 -V48 -0.140465429374089 L34 -R155 -0.145412647845201 L34 -R158 -0.148624473264849 F33 -V48 -0.148894920764036 F33 -Y157 -0.153830783030246 L41 -Y156 -0.156044827233866 I31 -L44 -0.158307869766671 F33 -Y156 -0.165270613163533 S45 -H154 -0.169983475672793 V43 -R155 -0.170656712530339 I40 -R155 -0.171140253789885 S50 -I153 -0.172506658561578 F33 -S45 -0.173697596429935 Y49 -I153 -0.174783118851591 S36 -L41 -0.188488712457424 L34 -H154 -0.192116163871098 L34 -Y156 -0.193332787914613 I40 -I47 -0.195334923850967 I40 -G46 -0.197594022840706 V37 -R158 -0.199101847958209 I31 -I38 -0.199599569729957 V37 -Y156 -0.204378936392256 S32 -I42 -0.209831811132235 F35 -I42 -0.210678013433185 I42 -Y156 -0.225138080106693 F35 -V43 -0.229561714436965 F33 -L44 -0.230064489752035 I38 -I47 -0.245669688481989 I31 -L41 -0.257074975947711 L44 -S50 -0.291538725306035 S39 -V48 -0.327305114968743 V37 -V43 -0.334105029442789 V43 -S50 -0.336802493446279 L34 -V43 -0.347813033375042 S32 -V43 -0.35149430363752 S32 -V37 -0.353328794370528 V43 -Y156 -0.37221113026227 I38 -L44 -0.389580167925414 L41 -V48 -0.403727460614269 L44 -Y49 -0.412336190809764 I42 -H154 -0.443371301786787 I31 -V37 -0.477045654569032