[Fri Aug 26 17:58:58 2016] >Input file: TMQ6ZNB7M1D.pdb >TM segments: 237-265 MAIDEN score = -6.7988 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V239 -D244 0.848370240056179 L240 -K245 0.474396205174791 I246 -A252 0.38651538837622 A237 -K245 0.335216166377029 I246 -K256 0.284215088216279 W243 -G248 0.269866749916745 F247 -A252 0.217708367495908 I246 -E253 0.205347852976636 E253 -V258 0.205007709981892 A237 -D244 0.194612882728908 G248 -N254 0.189170971520595 W243 -K256 0.187813539757458 K245 -E255 0.182994993575152 F250 -V257 0.173673521011314 E251 -V257 0.168289621583717 E255 -T262 0.166251854287847 E251 -Y259 0.160894276825423 K256 -L261 0.159943834921471 G238 -G248 0.158202872111102 W243 -E253 0.157678592051756 T249 -E255 0.146965512811677 I246 -Y259 0.14198504552759 D244 -K256 0.136853517276951 I242 -T249 0.126963040056714 T249 -N254 0.117386778221527 K245 -E253 0.116761998278767 F250 -E255 0.113479390983371 A252 -Y259 0.110358866853961 V239 -T249 0.106673493817481 I246 -N254 0.105537609019292 W243 -N254 0.103960506222374 D244 -E251 0.103329760704619 L240 -G248 0.0997526101916009 E255 -L261 0.0816303633280842 G238 -W243 0.0759394249600271 T249 -V257 0.0688772127749575 A237 -I246 0.0563403984121633 F247 -E253 0.0539444827496616 I241 -T249 0.0531296761634883 I242 -V257 0.0457631535049856 G248 -G260 0.0450595515864163 T249 -K256 0.0448986680194983 G238 -I246 0.0350075892130821 A252 -G260 0.030441307676095 I246 -G260 0.0295135665070347 I241 -G248 0.02742890524957 G248 -Y259 0.0271843039076405 L240 -T249 0.0262568089485602 E251 -G260 0.0214656620964935 I242 -F250 0.0214070487701177 N254 -Y259 0.0206012354688315 W243 -E255 0.0109426777261779 F250 -V258 0.00864933820855507 A237 -I242 0.00615833856263315 L240 -I246 -0.000446566218983868 L240 -F250 -0.0104116932278675 K245 -A252 -0.0106649754688419 G238 -K245 -0.0118559772023585 V258 -H263 -0.0152854870495268 E253 -L261 -0.0192429160387581 F247 -N254 -0.0276204307517052 K256 -I265 -0.0316785064817111 T249 -V258 -0.0331711400227097 I246 -V258 -0.033681865809168 W243 -E251 -0.0438178521147181 Y259 -P264 -0.0442433500587007 I242 -K256 -0.0462376243195513 I241 -E253 -0.0484555457230957 D244 -A252 -0.0488816329066433 D244 -N254 -0.053227930725857 I241 -F250 -0.0547469691639604 W243 -V257 -0.0559245496900873 I242 -A252 -0.0723875752035354 G248 -V257 -0.0747162722477381 V239 -K245 -0.0797798226558593 F247 -V257 -0.0810318614195644 L240 -E253 -0.0863809428547462 E255 -H263 -0.0866262721177709 G248 -V258 -0.0892671186546927 E251 -K256 -0.08965493283753 N254 -T262 -0.09119413697058 V239 -F247 -0.092935032677679 D244 -E253 -0.0994580259538015 V257 -P264 -0.111176568242263 G238 -F247 -0.114132450229151 I241 -I246 -0.118016712419319 I242 -F247 -0.120074914796996 F247 -V258 -0.121009151929694 D244 -T249 -0.123731987502577 D244 -F250 -0.124572288315306 N254 -G260 -0.131588713060176 L240 -F247 -0.140470183569406 I242 -E253 -0.143857338417048 E251 -L261 -0.148033684517648 I242 -N254 -0.148276489714791 I241 -A252 -0.149956998066491 V239 -G248 -0.153342876973038 W243 -A252 -0.155845292971909 K256 -P264 -0.156722462406786 W243 -F250 -0.157942273606502 G238 -D244 -0.158966086451729 A252 -L261 -0.160439619449263 K245 -K256 -0.173908477643959 N254 -H263 -0.175189835195209 V239 -E253 -0.178767173290342 K245 -V257 -0.180268854249564 N254 -L261 -0.185435312136583 E253 -T262 -0.186843205844784 I246 -V257 -0.191958188102309 G248 -E255 -0.192035688472511 I246 -E255 -0.192118848765955 K245 -F250 -0.195302721115877 E253 -Y259 -0.198385705641469 E253 -G260 -0.198411658566053 Y259 -I265 -0.200017398190244 V258 -I265 -0.200740983989936 F247 -K256 -0.202550208986216 V257 -I265 -0.20895613427842 K245 -N254 -0.210543683778282 G260 -I265 -0.212495858354351 V258 -P264 -0.213790860850098 K245 -E251 -0.215176988728908 F250 -K256 -0.231699440755628 I246 -E251 -0.232724202603894 V257 -T262 -0.235207559572017 A237 -W243 -0.245001877874974 G248 -K256 -0.253672844539016 D244 -E255 -0.265904604710002 E255 -G260 -0.266698652920147 I242 -G248 -0.266927971401803 I241 -F247 -0.267454613664771 K256 -T262 -0.267715755149846 W243 -T249 -0.274253653161116 V239 -I246 -0.278100558190664 K256 -H263 -0.295671912097566 V257 -H263 -0.297562786735471 E255 -P264 -0.323817265357299 E251 -V258 -0.340918731953519 A252 -V258 -0.366360554496176 A252 -V257 -0.418628341166313 F247 -E255 -0.464223200743053 G248 -E253 -0.568974718595967