[Mon Aug 29 17:18:31 2016] >Input file: TMQ84JF8S3G.pdb >TM segments: B458-475_B477-487_B550-561 MAIDEN score = 63.9033 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C466B-F481B 10 L459B-K551B 10 N458B-K551B 10 C461B-E485B 10 C469B-D474B 10 H465B-L482B 3.39413793412564 I467B-V480B 1.68501190036669 I467B-D473B 1.38246557394004 D473B-V480B 1.23386998917404 L462B-I483B 1.21974802724265 C466B-V480B 1.20866252067502 L463B-I483B 1.12249096040796 C461B-Y484B 1.08448496442457 K472B-F481B 0.970423965120704 D474B-V480B 0.944847721698937 I467B-D474B 0.778845993157021 D473B-E478B 0.777641303844498 I467B-K472B 0.735376622707705 V460B-L552B 0.73518515002529 C466B-L482B 0.71813968957696 I467B-F481B 0.608725870073148 G464B-Y484B 0.574034233917957 D468B-F481B 0.544829321146894 C469B-K479B 0.533811176610293 C466B-D473B 0.460721181627294 G471B-V480B 0.425168489116533 V460B-Y484B 0.422653737535473 D473B-F481B 0.398840210525266 K472B-V477B 0.398382398210032 C466B-K479B 0.391439639599512 H465B-I483B 0.373646029972722 L459B-L552B 0.3706074938366 L459B-S553B 0.365639763485346 C466B-K472B 0.361790976166321 V460B-K551B 0.356349883162256 I487B-K551B 0.354692813835801 I467B-E478B 0.35402134838483 L459B-A550B 0.338902812267833 V460B-D554B 0.334941319830298 I467B-K479B 0.322675490943894 H465B-D473B 0.296607114124957 H465B-F481B 0.279579559898548 C466B-E485B 0.250904863371728 G470B-F481B 0.247870146388251 L462B-Y484B 0.243215034607067 E478B-G556B 0.242924533494202 L462B-L482B 0.240992391741749 C461B-K551B 0.238182021019806 Y486B-S553B 0.237486115687797 K472B-V480B 0.2313565474062 D468B-V477B 0.230114981711181 E485B-K551B 0.228386774427244 C469B-V480B 0.215038827521626 C469B-Y475B 0.208942698254115 G464B-L482B 0.200736382922651 C466B-V477B 0.199747306238057 G470B-V477B 0.196444032345064 C461B-Y486B 0.189961842210665 C466B-Y475B 0.189150969559277 L459B-S558B 0.171151021627381 H465B-V480B 0.155138211415228 L482B-G556B 0.145880234703028 D468B-V480B 0.140564406906815 G464B-I483B 0.13800301903751 C461B-L482B 0.131101488670359 G464B-Y486B 0.130273903887975 D468B-D474B 0.126906329431804 N458B-L552B 0.122896380856669 G471B-E478B 0.118885070106723 Y486B-A550B 0.115682251892322 V480B-G556B 0.113988261445473 I483B-Y555B 0.112398681689846 L482B-S553B 0.108311966574214 I467B-I483B 0.107175265573712 L459B-L557B 0.104440988394983 H465B-G471B 0.10227822953854 H465B-E478B 0.0953713520449684 L552B-S558B 0.0949565134820343 L462B-L552B 0.0919790965796627 Y484B-G556B 0.0887213086317278 L552B-I559B 0.0875793086568112 C461B-S558B 0.0822688699425794 F481B-D554B 0.0797971202571731 L459B-I483B 0.0732227341689082 G471B-V477B 0.0578741615162759 G470B-E478B 0.0555577970832053 E485B-D554B 0.0543115968896011 N458B-Y555B 0.0534862130934541 Y486B-L552B 0.0519342357268302 G471B-L482B 0.0514531125368274 Y555B-V560B 0.0440795209180962 H465B-G470B 0.041051741746948 L552B-L557B 0.0374394694769107 D468B-K479B 0.0361709513890394 L462B-V480B 0.0345759773862628 V477B-L482B 0.0340261067625365 D474B-F481B 0.0264562154795476 V460B-L557B 0.0254713607743193 H465B-D554B 0.0244205615254742 H465B-G556B 0.0221459765433446 Y555B-S561B 0.0194834799977937 N458B-I487B 0.0192473854107131 D468B-D473B 0.0183258451578969 G464B-K479B 0.0159252099337525 K479B-G556B 0.0149923979795621 V460B-G556B 0.0136298428855501 N458B-Y484B 0.0133458179784713 L463B-L482B 0.0117975390150349 L459B-E485B 0.00790413567398129 C469B-L482B 0.00720043492157751 L462B-G556B 0.00649707997956384 F481B-Y555B 0.000246668068596634 N458B-Y486B -0.00380634242253519 E485B-S553B -0.00486743554978464 H465B-Y555B -0.0104770085453501 G464B-D554B -0.010744736571255 G556B-S561B -0.0110267404815414 G464B-V480B -0.0112067978455688 C466B-I483B -0.0115050220714163 F481B-G556B -0.0121716401953162 G470B-Y475B -0.0178285893592394 L463B-I487B -0.0203937577466782 L462B-K551B -0.0224448531537993 E485B-A550B -0.0234481975931811 E485B-L552B -0.0284465448435753 D468B-L482B -0.0340232135755076 Y484B-A550B -0.0343273195633969 L482B-D554B -0.0352888286209804 D473B-I483B -0.0358582643824882 L459B-G556B -0.0361794988017478 I483B-S553B -0.0399940035233453 D468B-Y475B -0.0400388602090853 N458B-E485B -0.0422789669388959 L459B-D554B -0.0440951023007443 H465B-Y486B -0.0451484992462557 Y486B-D554B -0.0464387390062682 C461B-G556B -0.0488314420410862 C461B-A550B -0.0499189848126974 E478B-Y555B -0.0513456099299532 N458B-D554B -0.0554783053146402 I487B-D554B -0.0567586490857055 Y484B-S553B -0.0588651988063187 G464B-E478B -0.0621293573576911 D474B-K479B -0.0644474622982414 V477B-G556B -0.0669279490226664 K472B-E478B -0.072102165405902 I483B-K551B -0.0721429215763214 L462B-E485B -0.0725701306565618 V460B-S558B -0.0728684308750784 V460B-E485B -0.0747848226814372 L459B-I487B -0.0781451904788377 S553B-I559B -0.0802615653411793 I487B-L552B -0.081049366372945 L482B-I487B -0.0816852149861855 L463B-S553B -0.0817976423255917 L463B-F481B -0.0834087401438817 E478B-I483B -0.0835873546447052 G464B-Y555B -0.0856338413895656 I467B-Y484B -0.0861737417963202 L462B-I467B -0.0874228594554918 L463B-V480B -0.0904657815968921 L462B-Y555B -0.0941516192611704 L463B-D554B -0.0942778110513889 L462B-I487B -0.0952769922940188 D468B-E478B -0.0953211308612639 L462B-F481B -0.0954129435898294 I483B-G556B -0.098156646296264 Y486B-K551B -0.0988747401224535 D468B-I483B -0.100138144507789 E485B-Y555B -0.100155088014655 G464B-D473B -0.10259299228914 Y484B-D554B -0.103241453967466 Y484B-L552B -0.104445811382331 L459B-Y486B -0.104955559011648 L482B-Y555B -0.10505114363497 S553B-S558B -0.107028399788144 G471B-I483B -0.107637254816917 K472B-I483B -0.108445103673995 Y475B-F481B -0.11001014964963 G464B-E485B -0.117158232084769 D474B-L482B -0.117748108701135 H465B-E485B -0.120535076537956 C469B-V477B -0.128228816260515 L462B-S558B -0.129403555058094 H465B-K472B -0.138517722598253 I467B-Y475B -0.142130560362742 F481B-Y486B -0.146383337191679 I487B-S553B -0.150733702166153 V460B-I487B -0.155569704132661 Y484B-K551B -0.156459994298915 I483B-D554B -0.156679164805257 V460B-I483B -0.160914957939915 G470B-K479B -0.161537328024745 E478B-L557B -0.162104493307009 D554B-I559B -0.165682454142255 L463B-K551B -0.166846433208697 L463B-E485B -0.170962089150095 C461B-L552B -0.174048651321552 K472B-L482B -0.176055917071797 L463B-Y486B -0.177365304038438 H465B-K479B -0.177795658915211 L459B-Y484B -0.178988362155044 I487B-A550B -0.179169968020096 C461B-F481B -0.181712278848796 I467B-V477B -0.185940726553793 C461B-S553B -0.193677801799791 G464B-F481B -0.199795131983387 L462B-Y486B -0.201029623880277 G470B-V480B -0.201327688259389 L463B-Y555B -0.203482253121123 C466B-D474B -0.204352884034642 V460B-Y486B -0.209973590285637 D473B-L482B -0.2158783204302 L459B-Y555B -0.225721775216635 H465B-V477B -0.232062005152505 V460B-L482B -0.233234796487871 N458B-S553B -0.234178088627516 C466B-Y484B -0.234513153359878 V480B-D554B -0.238669619521963 V460B-Y555B -0.245842268784727 G471B-F481B -0.248123768295316 C466B-G471B -0.248140362007556 C461B-Y555B -0.25361650011588 G471B-K479B -0.254037942547753 H465B-D474B -0.260072041622612 C461B-I487B -0.272649692318674 D554B-V560B -0.277192353260857 V460B-H465B -0.278866970237827 V460B-A550B -0.287737802666316 C466B-E478B -0.30006592574141 L462B-D554B -0.306304337913997 Y484B-Y555B -0.314055574960785 L463B-Y484B -0.315247563177714 Y475B-V480B -0.315888207494634 K472B-K479B -0.322904300081225 L462B-S553B -0.337379646259097 I467B-L482B -0.37471348382909 C461B-D554B -0.374811675298321 V460B-S553B -0.378654722289896 H465B-Y484B -0.3808018747971 C469B-E478B -0.392198444404692 C469B-F481B -0.503043430953124 D473B-K479B -0.533035201058999 N458B-A550B -0.554917396099629 C461B-I483B -0.702642379886232