[Mon Aug 29 17:49:03 2016] >Input file: TMQ8R310M1G.pdb >TM segments: 304-332_ 341-355 MAIDEN score = -0.8586 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E307 -L314 1.67488321761757 R308 -L314 1.37395320874392 E312 -L318 0.773141955832087 Y309 -L314 0.684198772884785 L332 -Y348 0.677782971977045 L304 -L314 0.658043068220271 Q305 -L314 0.655381097013489 L332 -A347 0.572449968797256 R310 -L318 0.566623872870061 E306 -L314 0.550952663839503 D320 -H327 0.45820447091838 L304 -R313 0.434475860980906 R308 -L318 0.429685048349087 H319 -H327 0.418579151709981 D320 -H325 0.394779895188927 A330 -A344 0.343723451492577 E306 -H319 0.2998604292053 R308 -D320 0.297101619764172 L321 -Q326 0.287179178327058 E306 -R313 0.285386244956705 R310 -D320 0.279849447054205 L304 -E312 0.272356845087662 E307 -D316 0.266355057544017 H325 -L332 0.25527388757698 E349 -Q355 0.246549463776643 Q346 -Q355 0.236720820388748 Y348 -D353 0.226923905674881 D316 -L321 0.226260748968317 Y309 -E315 0.211038895947696 N331 -E349 0.206413171903711 N331 -Y345 0.20522883561561 Y345 -R350 0.202997144951897 R350 -Q355 0.19991556453005 R310 -Q317 0.194482777037593 R313 -D320 0.176231307718522 Q305 -E312 0.167061696989175 E306 -Y311 0.166243307463015 Y309 -H319 0.161424066435901 Q317 -Q326 0.159508920803403 E307 -R313 0.157678269581451 A344 -R352 0.150646163029665 E341 -E349 0.148689248197537 R308 -E315 0.140562220562172 E315 -E323 0.124709991582898 T322 -N331 0.122916306068171 T329 -S351 0.122224815438827 Q326 -N331 0.112593674319376 A347 -Q355 0.112013805582179 A330 -A347 0.0997110314039737 H325 -A347 0.0947163616413249 A330 -S351 0.0926580187925694 L318 -E323 0.0926122227060233 A347 -R352 0.0878913614857728 H319 -E328 0.0873597156282657 L332 -E341 0.0854764815634866 H325 -S351 0.0835716274304377 Y309 -T322 0.0789117101340868 L314 -L321 0.0780507962144315 L304 -E315 0.0721242638379604 E307 -E315 0.0719635161854733 T329 -R352 0.0655990884774029 D320 -E328 0.0654526938400739 E312 -D320 0.0652052322638679 E328 -E349 0.0649511958418637 A344 -E349 0.0646576162130406 L321 -T329 0.0633885687743304 K342 -R350 0.0630035738069088 R310 -T322 0.0628599417971984 E341 -Y348 0.060604199090289 Y311 -D320 0.0581232559337259 E315 -D320 0.0515092704306106 R310 -E315 0.0499330108666709 L304 -Q317 0.049906050787234 N331 -V343 0.0495834278355316 Q326 -S351 0.0487021720219341 D316 -L324 0.0478731819922587 Q305 -R310 0.0469710136788684 T329 -E341 0.0468949053778136 H325 -Y348 0.0417238178295563 L332 -R352 0.04102343174001 V343 -S351 0.034257831290684 L332 -A344 0.0316136082837439 L332 -E349 0.028346352006962 Q317 -H325 0.0272890624806545 H327 -A344 0.0256957667461855 Y311 -H325 0.0247059858747409 E307 -H319 0.0234237750663384 A330 -Y348 0.0203255525844437 H325 -R352 0.0176675963394815 Q305 -E315 0.0171990583916193 E341 -R350 0.0170331847394314 Y309 -D316 0.0169150187898026 D320 -T329 0.0167652203634718 H327 -S351 0.0167071227459483 E306 -L318 0.016459590746015 N331 -S351 0.0154810175978606 K342 -S351 0.014054715093323 E307 -L318 0.0129460341253393 E315 -T322 0.0096492952916849 E312 -H319 0.00958547949437882 L314 -D320 0.00819183587627581 N331 -E341 0.00747044859578594 L332 -R350 0.00255615351125726 T322 -H327 0.000101938406738888 Y311 -D316 8.68214980518367e-05 L324 -S351 -0.00106928778106652 K342 -E349 -0.0119529039537918 R308 -L321 -0.0119610286606076 E312 -L321 -0.0124934280357516 E306 -Q317 -0.0137126067463744 H327 -Y348 -0.0177336844168812 Y348 -Q355 -0.0184916609528289 A330 -V343 -0.019170265770482 N331 -R350 -0.0202398296402559 Y345 -D353 -0.0206733980714802 Q305 -Q317 -0.0228029953906539 Y311 -T322 -0.0232094908256645 E323 -N331 -0.0269320414734335 Q305 -L318 -0.0280913863755998 E328 -Q346 -0.0295329246448228 Y311 -Q317 -0.0298080206589297 Q346 -I354 -0.0301495104769254 R308 -T322 -0.0321831151024139 A330 -E341 -0.0355443807547507 T329 -Q346 -0.0364648324672417 E328 -Y345 -0.038137908582029 Q346 -D353 -0.0404673038844161 T329 -R350 -0.0431468375643346 K342 -A347 -0.0453299974341306 E315 -L321 -0.0480666598291943 L324 -L332 -0.0536056446655842 N331 -Q346 -0.0538692308334179 N331 -Y348 -0.0554065969144109 E312 -T322 -0.0590503035133443 L321 -E328 -0.0595891653915093 R313 -L321 -0.0604878811824858 L314 -T322 -0.060599198925364 Y311 -L324 -0.060773379304909 R308 -R313 -0.0616403668428288 H319 -L324 -0.0641744554009041 E328 -S351 -0.0642230157939692 Q346 -R352 -0.0648980221201101 D320 -Q326 -0.0667992109556512 T329 -Y345 -0.0673160221156666 L324 -A330 -0.0683849253283721 L332 -Y345 -0.0693030340210816 Y311 -E323 -0.0720023008415875 D316 -E323 -0.0736256191520172 Y309 -L321 -0.0742651672306405 T329 -V343 -0.0745697650339641 E307 -E312 -0.0752574633515106 Q346 -S351 -0.0799406612037183 T322 -E328 -0.0833079658107749 T329 -Y348 -0.0837451454626499 N331 -A347 -0.0840727147038547 T329 -A347 -0.0842781844634999 Q305 -D316 -0.0855697129917463 L304 -L318 -0.086688781851894 Y345 -R352 -0.0878020817279626 Q305 -R313 -0.090297891421955 Y309 -L318 -0.0913976571153361 E306 -D316 -0.092611914815977 Y311 -L321 -0.0935056696791952 A347 -I354 -0.0941581478005991 Q326 -Y348 -0.0957233386479115 H325 -N331 -0.097868451850299 D316 -H325 -0.0981672553650537 T322 -A330 -0.0998454066116847 Q317 -E323 -0.100158090193343 L304 -Y309 -0.10273625161617 Y345 -S351 -0.103959897011259 R313 -H319 -0.104135358155878 H319 -Q326 -0.104850584547319 A330 -Y345 -0.106262295587584 Q317 -T322 -0.108243353005492 E349 -I354 -0.108764709300143 L321 -A330 -0.109394079469409 R310 -D316 -0.110759912871476 E306 -E312 -0.111027256105702 E307 -D320 -0.114215703161124 H327 -A347 -0.114829797988914 E323 -E328 -0.118226170363953 E307 -L321 -0.120992965205896 L321 -H327 -0.121324366099306 R308 -H319 -0.12511725930814 R310 -H319 -0.134641663318539 L321 -N331 -0.139445520594123 A344 -D353 -0.145815785485988 N331 -K342 -0.150043546926914 T329 -A344 -0.151292239936218 V343 -R352 -0.151589534837512 E341 -A347 -0.152274390153937 T322 -T329 -0.155993791477126 L304 -Y311 -0.158449958308167 L332 -S351 -0.159291544939011 L318 -Q326 -0.159605556454439 E323 -L332 -0.161192376114326 V343 -R350 -0.163248479166437 E328 -R350 -0.165144706204573 D316 -T322 -0.16587509157422 E315 -L324 -0.1662083405458 Y348 -I354 -0.167898937084336 E328 -R352 -0.168913034293267 Y309 -D320 -0.171289806718778 N331 -A344 -0.171493860350234 E328 -A344 -0.174242506049053 L314 -H319 -0.181791644010219 E323 -T329 -0.183138238342998 E328 -V343 -0.184615174763022 E328 -Y348 -0.186048306590818 T329 -E349 -0.187490316499982 R310 -L321 -0.187914566679222 E323 -A330 -0.191424324058973 K342 -Y348 -0.200524993312579 L332 -K342 -0.203019582332665 A344 -S351 -0.203332806475779 L304 -D316 -0.203827696146354 A344 -R350 -0.2041152992999 E328 -A347 -0.209286651379872 L318 -H325 -0.215961592060451 E306 -E315 -0.215985788811028 L304 -R310 -0.218561845869232 L324 -T329 -0.22244794449594 Y311 -L318 -0.223104181781375 A347 -D353 -0.228555978983523 R308 -Q317 -0.229317578456206 R313 -L318 -0.236859352134647 E341 -Q346 -0.238430384752213 V343 -Y348 -0.242153172965675 Q326 -L332 -0.243183911741659 Q317 -L324 -0.249004165142114 L324 -N331 -0.254464719031363 L318 -H327 -0.257326140522606 E307 -Q317 -0.260424205249084 E306 -D320 -0.267761206294928 E312 -Q317 -0.279037913267119 H319 -H325 -0.286486243536662 V343 -E349 -0.300388047506748 Q305 -Y311 -0.326168181530816 Y311 -H319 -0.369204038341603 L318 -L324 -0.379935925472919 H327 -L332 -0.401837206781133 L332 -V343 -0.434821352987438 L332 -Q346 -0.474622797961451 Y309 -Q317 -0.496253775034118 H325 -A330 -0.512626466191678 Q317 -H327 -0.552588963668938 R308 -D316 -0.586200941580844