[Fri Aug 26 18:21:32 2016] >Input file: TMQ8WY98M1D.pdb >TM segments: 25-31_ 40-53_ 70-78 MAIDEN score = 0.6684 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K26 -L70 1.19159974984972 L25 -L70 0.941904047761867 L25 -Y71 0.686554066735108 Q46 -L51 0.62758835638261 Q43 -M48 0.556488573093949 A30 -E47 0.524137310798552 A28 -T50 0.505444681675297 S29 -E47 0.498606547319262 R27 -L51 0.397231571411383 K26 -K49 0.389275640016473 A30 -A41 0.375913311245002 G31 -Q43 0.365527794152978 K26 -Y71 0.355842865900885 Y72 -S77 0.352922422641861 A28 -E47 0.341824489157832 S29 -Q43 0.335707238045008 A28 -Q46 0.283211690470923 L45 -T50 0.262113080111034 S29 -L45 0.25243685821793 A30 -Q46 0.249531961875101 Y71 -S77 0.249361539094538 S29 -L44 0.211020539464374 S29 -A41 0.205786818747988 L25 -T50 0.203669235874639 S29 -Y71 0.202519668214214 K26 -T50 0.200684672129633 R27 -K49 0.200052686126464 G31 -S77 0.183885593614653 G31 -Y71 0.177116360981394 A41 -T50 0.170911948756557 R27 -M48 0.156550047693674 E47 -F52 0.14065197107373 S29 -L70 0.125873026027772 L70 -A76 0.119403347501924 R27 -F52 0.118583499581187 L44 -L53 0.111755085584786 G31 -T78 0.110124681302585 L51 -L73 0.107518791967889 A28 -Q42 0.106215000806452 S29 -A76 0.105823837795004 G31 -A76 0.104844046039398 R27 -Q43 0.100524566221047 L53 -L70 0.0985688753874912 A30 -S77 0.093940290159279 K26 -L73 0.0928206738034465 T50 -Y72 0.0922813854921021 A30 -T50 0.0910431362318644 S29 -W40 0.0909369730416274 L25 -Q46 0.0906087953685157 A30 -L51 0.0881127194736371 A28 -Y71 0.0878419309636713 R27 -L53 0.0859700028647264 L44 -K49 0.0794873334978439 L44 -L73 0.0774207706329522 W40 -L45 0.0773739034142329 L25 -L75 0.07440550925614 E47 -L73 0.0712228037672396 E47 -Y72 0.0709040592556596 R27 -L70 0.068086437394463 A30 -K49 0.0661619065827761 K26 -L45 0.0648584823457719 Q43 -K49 0.063047763633274 L25 -A76 0.0482196009017493 K26 -T74 0.0428375800682104 W40 -K49 0.041825807548689 S29 -F52 0.0408198995237163 S29 -Y72 0.0400912733544456 A28 -Y72 0.0397917311791014 A30 -Q42 0.039729204865556 A30 -Y72 0.037719920415535 L51 -Y72 0.0272670533039703 L45 -L51 0.0270196730823633 A28 -Q43 0.0244524917493441 L44 -F52 0.0236961520656951 K26 -M48 0.0200107020339435 A28 -F52 0.0150353869140814 F52 -L70 0.0148683440340927 L25 -L53 0.00620441573113339 R27 -L45 0.000888534531013008 Q42 -L51 -0.000855211469589889 K26 -G31 -0.000939861850240753 G31 -L51 -0.00109239570537445 G31 -L73 -0.00236194193223915 M48 -A76 -0.00390454953810071 Y71 -T78 -0.00447688285429582 Q42 -F52 -0.0066022446249292 R27 -Y71 -0.00692499050755124 M48 -L53 -0.00894981299598108 E47 -L70 -0.011277490431531 Y71 -A76 -0.0127880959557185 G31 -L45 -0.0129247155992065 R27 -Q46 -0.0132940883490327 L25 -T74 -0.015643857831364 Q46 -Y71 -0.0185399410595126 T50 -L70 -0.0191732245229348 A28 -L44 -0.0193050178539398 S29 -L73 -0.0207404211872446 G31 -M48 -0.0233299798309567 G31 -A41 -0.0236123731693076 L25 -E47 -0.0273972692348359 S29 -Q42 -0.0316480784899715 E47 -A76 -0.032912662442582 S29 -T50 -0.0332142458642064 G31 -Y72 -0.0366590720330571 A30 -Y71 -0.0380954293569271 R27 -T50 -0.0389455018840539 G31 -T50 -0.0420262663806628 R27 -E47 -0.043837345740773 Q46 -F52 -0.0466146195209706 L44 -Y71 -0.050755083253863 A41 -Q46 -0.0530313884737768 G31 -Q42 -0.0546522544420078 A28 -L45 -0.0567365916449125 S29 -K49 -0.0616030535220554 K49 -Y71 -0.0625849425170042 W40 -T50 -0.0657284098104525 Q43 -Y71 -0.0680085878317985 A28 -L53 -0.0683548184463127 G31 -Q46 -0.0695196256961554 Q43 -Y72 -0.0705259342509901 K26 -L51 -0.07057536149326 A28 -L70 -0.0728750917844811 L44 -T50 -0.0751977359910487 A30 -L44 -0.0805874059058631 K26 -L44 -0.0822214726477366 Q43 -T50 -0.0829075575926339 W40 -Q46 -0.0938537449533046 K26 -E47 -0.0940239239243401 S29 -L53 -0.0956906710582461 T50 -Y71 -0.0976559828359691 R27 -Y72 -0.105184090530455 Y72 -T78 -0.114337214389132 Q43 -F52 -0.115316960210389 K49 -L70 -0.121256665485665 M48 -Y72 -0.127238292872228 K26 -F52 -0.127314398865089 M48 -L73 -0.128420722374448 M48 -L70 -0.130908346406098 L25 -M48 -0.131465679645978 A30 -W40 -0.132292719372975 L73 -T78 -0.13429432555581 W40 -E47 -0.13516437459389 L25 -A30 -0.138471508553431 F52 -Y71 -0.140623987712466 A41 -E47 -0.1445113014367 G31 -K49 -0.146573239555527 K26 -Q43 -0.14807315892781 R27 -L44 -0.150043129893187 L53 -Y71 -0.151297579779187 R27 -L73 -0.154073835518686 Q43 -L51 -0.155927581447874 S29 -M48 -0.15814455057399 L25 -K49 -0.158707527878487 L25 -L73 -0.159693921078517 S29 -L51 -0.16157977683377 W40 -M48 -0.162623687037517 L25 -F52 -0.16374430137973 K26 -Y72 -0.164354690522615 L44 -Y72 -0.165661330878034 G31 -L44 -0.172776993046396 A30 -L45 -0.173140502461732 L45 -L53 -0.177623012003673 L25 -Y72 -0.178453090456188 E47 -Y71 -0.180638616880265 M48 -Y71 -0.180730430994175 K26 -Q46 -0.184354919999373 Q42 -K49 -0.186093293632535 L70 -S77 -0.186648222943046 Q42 -T50 -0.193781766955905 L51 -Y71 -0.210043526538173 E47 -L53 -0.21120032717189 A30 -M48 -0.228181716938935 G31 -W40 -0.231288782431203 A41 -M48 -0.234528131573282 Q46 -L53 -0.23517612122593 L44 -L51 -0.239034194376197 K26 -L53 -0.239558166084473 L45 -F52 -0.24976678413889 G31 -E47 -0.276780253462938 L70 -L75 -0.286248996887885 A28 -L51 -0.302982254310724 Q42 -E47 -0.305628512446899 A28 -K49 -0.317227331624444 Q42 -M48 -0.335005980649499 L25 -L51 -0.35057730192809 S29 -Q46 -0.35590447285005 A41 -K49 -0.358580616647255 A28 -M48 -0.414349738680119 A30 -Q43 -0.452268064756117 L51 -L70 -0.45287356493974