[Fri Aug 26 18:37:04 2016] >Input file: TMQ8XRN4M1D.pdb >TM segments: 125-145 MAIDEN score = -7.2510 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I125 -L130 0.537611978251796 G127 -F134 0.183099979259762 G129 -A139 0.163025657903928 I128 -G135 0.143822982315221 G127 -G135 0.130226867308271 G129 -G137 0.0814933449790047 A139 -W145 0.0807743686889371 L130 -G135 0.0803338967382335 G131 -A139 0.0755164675946363 G135 -E143 0.0749043356700048 A126 -G135 0.0715516110436982 I125 -I136 0.0652982561279094 G137 -A144 0.0597219259845021 A126 -F134 0.0523403700496043 I125 -F134 0.0455818133667782 F134 -A142 0.0450167501196956 M138 -W145 0.0353055589308235 G132 -A141 0.0213291265553157 E133 -A141 0.00330839910733616 G132 -L140 -0.00222373069704451 G132 -A139 -0.013835371192104 I136 -A144 -0.0165246290080516 G131 -M138 -0.0196528697745109 L130 -M138 -0.0208480599054273 I125 -G135 -0.0408913704519662 I136 -A141 -0.0476262440019948 I136 -A142 -0.0641984969918159 F134 -E143 -0.0659094297952967 L130 -A139 -0.0728201595433049 G135 -A142 -0.0749685216281055 G131 -L140 -0.0760925421455241 E133 -A142 -0.0864958700987359 I128 -E133 -0.104675097613742 I128 -G137 -0.108710090512188 E133 -A139 -0.111071665605845 G127 -I136 -0.112954841052728 G131 -G137 -0.113888759313563 G129 -G135 -0.127465158529485 E133 -L140 -0.133882087940143 L130 -G137 -0.143062093349271 I136 -E143 -0.151169424210509 L140 -W145 -0.153083335309386 G129 -M138 -0.169417466937279 G137 -E143 -0.172880380335787 F134 -A141 -0.179204156361426 G127 -E133 -0.179591958696778 A126 -E133 -0.18368932924157 G132 -M138 -0.186215458296811 G129 -I136 -0.191933859580771 E133 -M138 -0.194312172206525 I125 -E133 -0.195204024150003 F134 -L140 -0.195428585130159 M138 -E143 -0.207715547167203 M138 -A144 -0.223634916073937 A139 -A144 -0.239416239501135 G131 -I136 -0.239734524939172 I128 -F134 -0.243101985914381 G129 -F134 -0.248956707276827 I128 -I136 -0.251825107744468 G137 -A142 -0.253056148221517 A126 -G132 -0.26143806589037 I125 -G132 -0.262774774206997 G135 -A141 -0.26448713186876 I125 -G131 -0.273477938130125 G132 -G137 -0.37064190338884 L130 -I136 -0.378772324601946 G127 -G132 -0.411496118341672 G135 -L140 -0.416609779270039 F134 -A139 -0.457899339482993 A126 -G131 -0.486277396449994