[Fri Aug 26 17:01:56 2016] >Input file: TMQ8Y0C4M1D.pdb >TM segments: 705-712_ 714-736_ 746-764 MAIDEN score = 8.0074 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R708 -M717 10 I709 -M717 1.46412253987016 V706 -A719 1.34597148952212 I709 -A716 1.28016266659501 L707 -L718 1.26390597422786 T753 -L760 1.21778627733957 I722 -H748 1.02874614895335 A733 -R752 0.811054695288838 L707 -M717 0.764117259264143 I722 -S751 0.752470622282892 L707 -A719 0.673979503789341 A729 -E734 0.670184229836035 C705 -D721 0.643335077444228 S751 -S756 0.61087625230281 V706 -L718 0.606407234780456 G750 -S756 0.58226855479112 S751 -F759 0.548409564788479 T753 -F759 0.518616685596782 I709 -L718 0.497557722268165 P736 -H749 0.491368914097181 G750 -S755 0.477150289683802 R708 -A715 0.445788020101414 S751 -G757 0.436983784602641 E734 -V746 0.422190687830104 R752 -G757 0.400911343222284 H748 -S755 0.397091708610224 H748 -S754 0.392631579456418 A728 -A735 0.383956050205007 H748 -S756 0.375901475482591 P747 -S754 0.366409903409436 P747 -R752 0.34083696857223 R724 -L730 0.33577602681593 Q726 -E734 0.335499850734503 S754 -F759 0.333726810366175 C705 -H749 0.331071690765866 A733 -G757 0.330214023264535 A719 -A758 0.327385845881127 P736 -S751 0.312819812101188 A735 -G750 0.303976113909864 G723 -A729 0.297603935804804 P736 -H748 0.292742639515672 A725 -L730 0.282614734920644 A733 -H749 0.278373156700132 G723 -R752 0.264059250634881 G750 -D761 0.263408571960423 R724 -A732 0.242856154237296 C705 -A719 0.237413327516216 I709 -Y714 0.23452426159922 A728 -A733 0.221311919272289 L730 -H749 0.220938163974801 A735 -H749 0.219813722211871 V746 -S755 0.211028532627772 M717 -R752 0.207353421080534 C705 -G720 0.195889696789509 P736 -T753 0.195191940022196 A733 -D761 0.19327384556722 A715 -S764 0.191204673663754 V706 -M717 0.186457564002966 Q726 -T753 0.186103469857334 A716 -F759 0.18550894460908 R752 -F759 0.185368954560031 S754 -L760 0.183890688660637 V706 -G723 0.180218769407819 G720 -L760 0.179255523664024 R708 -R752 0.173783198223094 A728 -T753 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