[Fri Aug 26 16:53:19 2016] >Input file: TMQ9GIP4S1D.pdb >TM segments: A78-104_A125-140 MAIDEN score = -20.2602 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K132A-L137A 0.472251139180035 E78A-A85A 0.465811075116853 P128A-E136A 0.463971742388542 L127A-K132A 0.241567593610595 A79A-L84A 0.207216633993449 P82A-W89A 0.170872638060443 G80A-A90A 0.158048988731629 G125A-L133A 0.149319510166094 C92A-C102A 0.135883524145232 A79A-C92A 0.113628761847499 A90A-V98A 0.110039978563293 A85A-V94A 0.10596220657591 S126A-W134A 0.101976945834452 G93A-L101A 0.0958740925194146 K132A-I140A 0.0950952436489469 A85A-C92A 0.0850808684546775 L84A-W89A 0.0789433134228315 S81A-V88A 0.0788538583488845 G80A-V88A 0.0772705861587357 L133A-L138A 0.0769848718533823 G125A-K132A 0.0743906910613292 W89A-I97A 0.0742611402066384 W89A-V94A 0.0693045027617272 V88A-S96A 0.0586430145233083 S96A-A104A 0.0584087652072958 A79A-A90A 0.0559905527224789 L84A-A91A 0.0409347158677242 G83A-A91A 0.0370899644603382 E78A-V88A 0.0263175552517647 A90A-G99A 0.0258772118067343 A129A-L137A 0.0246562120650151 E78A-V87A 0.0225897028369606 L84A-G93A 0.00796542214234686 L84A-C92A 0.00577507104937203 A85A-G93A 0.00404007218086644 A79A-V87A 0.00335210908588124 Y103A-E136A 0.00102766241293395 G125A-W134A -0.000759816763256982 P82A-A91A -0.0046443569772201 P82A-A90A -0.0094730541465089 A79A-L86A -0.0106793073646398 A91A-G99A -0.017616543922722 P82A-V88A -0.0236325126399652 G80A-L86A -0.0238773214241981 E78A-A90A -0.0349093872489256 E78A-L84A -0.0399585707955801 C92A-A100A -0.0415477711151006 P128A-W134A -0.0428911020236451 L131A-I140A -0.0440042218187404 A91A-V98A -0.0467302260510154 E78A-L86A -0.0484413387543645 F95A-C102A -0.0525880953410989 S126A-K132A -0.0566353421481435 P128A-L137A -0.0573645014348314 S81A-W89A -0.0598897214355576 V87A-F95A -0.0603016645723118 A79A-A91A -0.0704807230166911 P128A-L138A -0.0742271731647257 A91A-A100A -0.0749997823129951 V94A-Y103A -0.0759317288006049 S126A-I135A -0.0773858284079894 C92A-G99A -0.0773873919500163 A90A-I97A -0.0801523642390478 C92A-L101A -0.0817969985395757 G83A-A90A -0.083587838577182 A129A-L138A -0.0896592869916439 G93A-A100A -0.0925806610808713 G93A-V98A -0.0931793707048474 L86A-G93A -0.0945776217694023 V94A-L101A -0.101107324511784 L133A-I139A -0.104109363361004 V87A-S96A -0.104540890473666 G93A-G99A -0.105715110121307 A129A-W134A -0.107982650182906 L131A-E136A -0.108225887849029 L127A-W134A -0.110941956779885 S81A-A90A -0.119918932617838 G80A-W89A -0.120115559494374 V88A-I97A -0.124557384462839 L86A-F95A -0.127117863700819 G80A-A85A -0.130518299481212 F130A-L138A -0.137328593207876 K132A-L138A -0.141264904790973 G93A-C102A -0.141676984045771 F130A-I139A -0.142773403623341 L131A-I139A -0.142868299081359 L127A-I135A -0.143504138658128 A79A-W89A -0.151270614050403 L127A-E136A -0.15490414784725 V94A-C102A -0.156128785551148 L84A-A90A -0.159446399934861 W134A-I139A -0.160066650205573 G80A-V87A -0.162668086913914 F95A-Y103A -0.162760952171783 L86A-V94A -0.173133674443232 F95A-A104A -0.176745698127074 F130A-L137A -0.177625985457646 V87A-G93A -0.183480239656877 I97A-Y103A -0.185508672296014 G83A-C92A -0.188540953193045 L131A-L138A -0.18854677414317 V88A-F95A -0.191292558801521 E78A-W89A -0.193563534965002 P128A-L133A -0.194780611801379 W89A-V98A -0.19856112399745 P82A-V87A -0.201465948133605 S126A-L133A -0.216351368935825 L86A-A91A -0.217304771710518 A90A-S96A -0.218899187830699 I97A-A104A -0.224958398696497 I135A-I140A -0.22735521489149 V94A-G99A -0.229477222091774 S81A-L86A -0.234240027488253 A85A-A91A -0.236231763642362 F95A-L101A -0.237176939814563 G83A-V88A -0.237462048830356 V88A-G93A -0.238010727803228 G125A-F130A -0.248105006436786 P128A-I135A -0.251779062715098 S96A-Y103A -0.252175372458924 V98A-Y103A -0.256860235984855 E78A-G83A -0.261447213622114 F130A-I135A -0.264301329128928 G83A-W89A -0.264800222524748 G125A-L131A -0.271335870171566 W89A-S96A -0.271482430515763 S126A-L131A -0.277543734745407 A129A-E136A -0.292498165098918 V87A-C92A -0.304657747828083 A129A-I135A -0.309779194642591 F95A-A100A -0.312527227444848 A91A-I97A -0.314851016874305 V87A-V94A -0.315368248637502 S96A-L101A -0.323138551270667 S81A-V87A -0.333963744488498 A79A-V88A -0.338873253519314 L131A-L137A -0.339919830264764 V88A-V94A -0.341219378885426 V98A-A104A -0.344621117981224 A79A-A85A -0.348071511151161 W134A-I140A -0.356804282455095 K132A-I139A -0.360542357770639 V94A-A100A -0.368778481898284 F130A-E136A -0.409629642286596 A85A-A90A -0.414924188096801 L133A-I140A -0.41769652081975 W89A-F95A -0.423370756391356 L86A-C92A -0.437341753679645 L127A-L133A -0.450389917023918 A90A-F95A -0.466403541746647 G99A-A104A -0.477037702048993 C92A-V98A -0.495459164654944 A91A-S96A -0.547181168964648 S96A-C102A -0.568941710144173 I97A-C102A -0.716940671292544 C92A-I97A -0.750554694946675