[Mon Aug 29 17:43:16 2016] >Input file: TMQ9P273S8G.pdb >TM segments: B595-620 MAIDEN score = -1.5952 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C600B-C609B 0.533524678354799 C600B-E610B 0.462816167950895 N601B-C609B 0.28013569747529 C600B-G606B 0.226331704437596 S597B-S608B 0.218975761027983 C598B-C609B 0.21890523797217 Y604B-C609B 0.187271816528211 G603B-A612B 0.168619074964209 S597B-K605B 0.161981505526904 N601B-E607B 0.143058662943031 S602B-C609B 0.139824224946104 N601B-E611B 0.132366291365425 Y604B-A612B 0.131537379193139 G606B-E611B 0.127654234342645 Y604B-E610B 0.105822283465213 S597B-E607B 0.102403221616822 A599B-S608B 0.0971740894252537 A599B-E607B 0.0802253804854338 D613B-S620B 0.0489835612887911 S602B-S608B 0.0399248108053714 C598B-S608B 0.0397367229683736 S602B-E610B 0.0385689944550229 G596B-G606B 0.0361366067311764 C598B-G603B 0.0246253518048132 C614B-C619B 0.0218247029081962 S602B-E611B 0.0161135493898739 N601B-E610B 0.0107401884484957 A612B-P617B -0.00830083400404824 C609B-C614B -0.0278324426642671 D613B-G618B -0.0399792349025501 S602B-E607B -0.0481665230987178 M595B-C600B -0.0557442366267011 E610B-I615B -0.0578766721388275 S597B-Y604B -0.0731715250641092 E607B-A612B -0.0893769030667115 C598B-G606B -0.0900467586603115 G603B-D613B -0.0936323184585053 G603B-C609B -0.0957786729974872 A599B-K605B -0.114907542564256 G603B-S608B -0.115899645111254 G603B-E610B -0.119313192316965 I615B-S620B -0.122453325382065 E611B-D616B -0.130107250186561 C598B-K605B -0.134758601335211 K605B-E611B -0.143350079952368 S597B-G606B -0.15399334316315 Y604B-E611B -0.154987160416732 C600B-E607B -0.183519632509847 N601B-G606B -0.185789246355798 G603B-E611B -0.18766342465899 C600B-K605B -0.191654873658377 N601B-S608B -0.195627833102876 C600B-S608B -0.216280525970057 A599B-Y604B -0.219648206050189 K605B-E610B -0.220962159657952 C598B-Y604B -0.230699912594592 Y604B-D613B -0.24003912411452 C598B-E607B -0.286899793666115 D613B-C619B -0.295545157218946 A599B-G606B -0.364137618449488 C614B-S620B -0.502349177685966