[Mon Aug 29 17:59:31 2016] >Input file: TMQ9SVF3S1G.pdb >TM segments: A197-215_A222-240_A252-270_A289-308_A319-335_A350-369 MAIDEN score = -27.9360 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C202A-G230A 10 C209A-D227A 10 I301A-I306A 1.23290952847052 L302A-I307A 1.21614188668775 F291A-Y328A 1.0047693852611 A229A-V269A 0.975305173214348 C202A-L234A 0.903288222929841 L327A-L361A 0.901569121064359 T268A-F290A 0.799426012625886 C209A-L224A 0.775835607301579 V334A-F358A 0.747508819028709 C209A-L226A 0.745194168327272 C209A-M223A 0.720341622127775 C202A-I231A 0.686091575642604 A205A-M223A 0.682309396711144 G331A-V362A 0.669081220968132 Y328A-L361A 0.654325709135207 Y240A-L258A 0.628146974596505 F295A-G325A 0.623749306426361 A232A-F290A 0.602945407782792 Y228A-V269A 0.591683648114683 C202A-D227A 0.587549513790353 I235A-M293A 0.581737224139101 T208A-M223A 0.557917928792901 V334A-H355A 0.552837367872975 A332A-F358A 0.506799471821517 G198A-L234A 0.506009732440596 P300A-E321A 0.491427801158469 F291A-A332A 0.489527156383645 A229A-T268A 0.478749277165187 P300A-L305A 0.477353723342075 C202A-H369A 0.471653587112171 F239A-L258A 0.458627706426844 L203A-D227A 0.45102071960166 I235A-G265A 0.450509673456695 S206A-L226A 0.449579086738725 G198A-S238A 0.443831423176686 A232A-M293A 0.436188610587768 I261A-S296A 0.433976056785353 A199A-T237A 0.416636474500684 R225A-V269A 0.416226157799825 F201A-D227A 0.401985683394172 L327A-V362A 0.398892566216017 S206A-H355A 0.397532322782486 A236A-I261A 0.384107966434553 A199A-A364A 0.370161004328231 T268A-L289A 0.359424910064095 M324A-T368A 0.356598071129849 L212A-M223A 0.355776218063875 C254A-T262A 0.355570982661841 Y257A-G294A 0.351786015776104 S238A-A366A 0.342281793722369 A233A-G265A 0.341972645152328 G294A-E321A 0.33030666955922 C202A-F358A 0.327259563157194 F239A-I261A 0.326916512033491 M324A-G365A 0.325178171545847 C254A-I306A 0.320696755075117 S213A-M223A 0.319708973703105 A233A-A267A 0.319300509244379 F201A-G230A 0.31801167676188 H210A-H359A 0.317238159508237 C254A-I307A 0.310831887381123 S296A-K304A 0.307949255639218 G259A-G297A 0.306820485699545 G265A-M293A 0.30606930276719 I231A-F290A 0.30541778848345 G198A-I235A 0.300689856123301 A205A-S213A 0.299723202535255 A236A-T262A 0.297370333401739 Y335A-L357A 0.296619475015481 G230A-H359A 0.2965045512689 C202A-I266A 0.295815822936802 A199A-L234A 0.292840712606049 L327A-A332A 0.290303544606684 L327A-A364A 0.289435788001039 C202A-V360A 0.288270264316383 C209A-G230A 0.288007040594846 G325A-L361A 0.286534501845008 Y335A-F358A 0.286437250575894 S296A-H303A 0.285241338149917 C254A-I263A 0.284411541827804 L264A-M293A 0.2842913320513 C202A-H210A 0.282299021012599 A267A-G292A 0.27894215759843 L203A-G230A 0.278246144470574 A199A-S238A 0.277504067298011 A299A-K304A 0.273439826776171 A232A-I266A 0.273411592914599 V334A-L357A 0.271072398851363 Y228A-H359A 0.270385027600157 C202A-A229A 0.268885204420259 S206A-G230A 0.267902647412504 A332A-G365A 0.262985702621754 L327A-H359A 0.254124286020885 S238A-G265A 0.25412094313464 G197A-T237A 0.250216331283132 A205A-A233A 0.248652163173041 L204A-D227A 0.247972967684041 G292A-A299A 0.247273245585819 I261A-M293A 0.245569642162313 G352A-L357A 0.241168928095306 C202A-A233A 0.240016155244667 F290A-G331A 0.239603591627146 H210A-G230A 0.235989104513026 F290A-G329A 0.232805849268758 F295A-A332A 0.231441659509023 Y257A-P300A 0.228769677991219 C209A-H359A 0.226117924031043 L234A-H369A 0.224565545810658 G294A-L326A 0.224455629597549 Y228A-V362A 0.221677537864113 S207A-H355A 0.218072431201727 A199A-A366A 0.216536702137633 G297A-H369A 0.21601230424861 A199A-S207A 0.215838112511731 C214A-I222A 0.215013869476639 A199A-F239A 0.213917037167696 G198A-Y228A 0.212209958095803 I231A-V363A 0.211046792613014 Y240A-C254A 0.210769448587351 T237A-G297A 0.208971375117029 T268A-M293A 0.208698370184047 G331A-L357A 0.20759952318808 S206A-V363A 0.207221227034712 S296A-G325A 0.206480478698325 D227A-V362A 0.205996834638758 S213A-L224A 0.204444356711964 I235A-T368A 0.200971257584272 G319A-T368A 0.196374392553757 L326A-T368A 0.195261363004262 I231A-T262A 0.19497622570539 G329A-V362A 0.192073650338789 A229A-T262A 0.191482160310782 I235A-V269A 0.19146035574859 G230A-I266A 0.187527268206955 Y320A-Y328A 0.186802695951364 I261A-G294A 0.186456742975253 F201A-L234A 0.185999237783927 T237A-G259A 0.185247616598871 A199A-A233A 0.184951436761252 C202A-I222A 0.183002631566843 S206A-Y228A 0.182782417005541 A351A-Q356A 0.182745114934924 R225A-A232A 0.182503086677897 S207A-G230A 0.179335913367455 S238A-Y328A 0.177186973536404 G230A-M293A 0.176852712789624 A232A-V269A 0.17669233119832 Y240A-F253A 0.175337765233891 G259A-M293A 0.172009635043328 T237A-T268A 0.170298152744173 T208A-C214A 0.169707310267269 L234A-M324A 0.169684826788599 I231A-A366A 0.169228397975485 H355A-V363A 0.168746686488756 H210A-L226A 0.167667370662025 S238A-Y257A 0.167102764226259 G198A-H369A 0.166938959911251 C202A-G265A 0.166895471491039 C202A-L224A 0.166705625201606 A233A-V362A 0.166629712967527 A232A-I263A 0.165769645296372 A205A-A232A 0.165698288694728 I261A-A299A 0.165628045784857 Y240A-G294A 0.165605721646543 G329A-L357A 0.165080218582411 H215A-I222A 0.164796027894952 G198A-T262A 0.164131278616612 I261A-I301A 0.163266113418599 G297A-G365A 0.16304955935205 A229A-G292A 0.162945255188124 G294A-L323A 0.161721729491727 G297A-A366A 0.161636831452177 A232A-G331A 0.161636831452177 D227A-T268A 0.161560255773498 I231A-H359A 0.160903582000514 I322A-H369A 0.159323835380802 V333A-H359A 0.158915799140628 A236A-A267A 0.158477157683903 P300A-G325A 0.158402428787808 Y328A-G365A 0.15828876874442 A232A-S296A 0.157605236496337 C214A-L224A 0.155360961388947 M223A-V269A 0.154973260824681 G230A-G365A 0.154641753005071 G319A-G325A 0.152729875588878 S207A-F358A 0.152517776449871 I235A-G294A 0.152016761235446 E321A-A366A 0.15165709997301 G325A-A366A 0.15099549582817 F239A-H303A 0.150963621214927 C202A-L361A 0.150316653527519 H359A-A366A 0.150181308555469 V333A-H353A 0.149629507651091 L264A-G297A 0.14922631474891 L270A-M293A 0.148481137795993 T208A-L226A 0.148284972879622 H210A-M223A 0.148250299221417 A233A-H369A 0.148128472789495 M293A-A299A 0.147790688236055 I231A-I261A 0.146984562841769 S213A-R225A 0.146294026833026 C202A-G294A 0.146183298436441 Q356A-A364A 0.145915475648171 G292A-G325A 0.145664481369038 Y328A-L367A 0.14540597143717 T237A-I263A 0.144937247725469 L256A-K304A 0.144681639443777 C209A-R225A 0.143507724039048 I235A-I266A 0.142837129774053 Y228A-H355A 0.14190112889118 Y257A-F295A 0.141643399717097 G265A-F291A 0.141531563858922 G297A-I322A 0.140988571145062 C202A-S238A 0.140490913293685 L289A-Y335A 0.139789063801828 G297A-Y320A 0.139700523579229 T208A-A229A 0.139377267234855 T262A-G297A 0.139282697271649 S206A-Q356A 0.139121140253011 V333A-S354A 0.139077839744708 A232A-H359A 0.138122417225724 C209A-H355A 0.138098320955343 Y240A-I301A 0.136738080211724 S238A-H369A 0.136457102281125 G329A-G365A 0.135740621220893 G197A-L234A 0.135626313857431 F201A-R225A 0.135484042109843 L298A-E321A 0.134856894949793 H210A-Y228A 0.134190993496321 M293A-I301A 0.134184333942409 Y240A-I263A 0.134158467411404 F252A-K304A 0.133092701410599 G198A-G365A 0.132053761357484 T237A-T368A 0.131479113901736 L256A-G297A 0.13026240790102 T208A-H215A 0.13005452407409 T208A-I231A 0.130021331203897 A232A-Y240A 0.129794427856774 I200A-G230A 0.129420852467958 Y228A-Y335A 0.128368380348925 L298A-Y320A 0.127404991992302 I200A-S238A 0.126923993110171 S207A-V360A 0.126748244421245 L361A-H369A 0.126653254473676 G329A-T368A 0.12621630946017 G294A-Y320A 0.125009158969402 T262A-G294A 0.124442407611607 H303A-F308A 0.12436709222878 I263A-G292A 0.124091878022438 A205A-H359A 0.121755646691782 A332A-A364A 0.120743374397575 A199A-Y228A 0.120721792779278 A199A-H359A 0.120468512997903 L323A-G331A 0.118881566287532 L330A-V360A 0.118652746457862 L289A-G329A 0.11861472012205 G292A-A332A 0.118154566739951 Y228A-A236A 0.117946052541775 G197A-T262A 0.117916162047212 F239A-F295A 0.117876372825442 I235A-Y257A 0.116262341483123 F260A-G294A 0.116203801622065 S207A-V362A 0.115972565759009 Y240A-A366A 0.115852978453085 L224A-L270A 0.115562303296899 G198A-L226A 0.115509533563626 G197A-A229A 0.115472985047657 F239A-G259A 0.115424680884191 A236A-S296A 0.11496243348712 G197A-G265A 0.114531814364325 I306A-Y320A 0.114371216139775 T268A-S296A 0.114349060680647 L226A-V269A 0.113957221925357 I231A-Y335A 0.113937124765834 I263A-G294A 0.113905919394524 G265A-G297A 0.113854135450074 H353A-V360A 0.11352772820965 L270A-L289A 0.11324155018028 G230A-V363A 0.112699105359184 L326A-G331A 0.112589273127891 C254A-P300A 0.112078880469104 L323A-L361A 0.111842789737053 G198A-A364A 0.11178592426249 S206A-L234A 0.11159206912877 Q356A-L361A 0.111534777427552 I301A-L323A 0.110854507889796 L298A-L323A 0.110410123484669 G292A-V333A 0.110131257111066 L203A-V360A 0.110075583823428 G230A-A366A 0.109426083791241 Y320A-A366A 0.109379234579493 H210A-A229A 0.109351378089351 G198A-V269A 0.108785701459993 G331A-H353A 0.108331552190368 L298A-L326A 0.108043430880409 S238A-V362A 0.107955875215485 G331A-F358A 0.107722356524352 R225A-A233A 0.106969648522434 A267A-S296A 0.106945645921787 I306A-I322A 0.10622750829145 S238A-A364A 0.10555561008846 Y320A-L327A 0.105142161610221 Y328A-H369A 0.104764318638205 S238A-L258A 0.104671662385922 S296A-A332A 0.103750480824408 L298A-G319A 0.102798798996244 T208A-R225A 0.102694071889373 A236A-A366A 0.10248493288427 S206A-C214A 0.102303669363873 L234A-Y328A 0.101932549036899 L323A-V362A 0.101887198688214 L330A-V363A 0.101753464481241 I266A-G294A 0.101404014644939 T237A-G294A 0.101095588280383 A233A-V363A 0.101058255518879 G331A-G352A 0.100892475678423 G259A-G294A 0.100516420098163 T208A-G230A 0.100216807903446 G197A-A366A 0.10014048789407 G294A-A332A 0.100040661589627 L234A-L367A 0.099834658202298 G198A-I261A 0.0994436693164612 T268A-G294A 0.0990083939242949 A232A-V363A 0.0984025156414856 L211A-L226A 0.0982350333420179 I266A-G292A 0.0979331657149621 L326A-V360A 0.0968977475076229 G294A-G331A 0.0967468229332065 A199A-A229A 0.096086325411104 S238A-C254A 0.0954283487969192 L234A-L361A 0.0953791728373052 G294A-G365A 0.0949159669685713 V334A-A351A 0.094296760453394 A233A-L258A 0.0940595254782708 K304A-G319A 0.0940569539972213 I322A-L367A 0.093655471255416 Y257A-G292A 0.0935834475980704 A236A-F295A 0.093569500757483 H210A-I222A 0.0935530876993216 S296A-I301A 0.0932217751200017 G325A-T368A 0.0930942439855237 Y328A-V333A 0.0930581183636328 G325A-A364A 0.0928111229314736 V269A-G292A 0.0925349589352542 A267A-G294A 0.0923776520368129 L204A-I235A 0.091622112183386 Y320A-L367A 0.0914813474553604 L203A-L357A 0.0912244056748763 F239A-G365A 0.0903462545919345 F252A-G259A 0.0901045680732118 L258A-K304A 0.0894969007664397 G230A-V362A 0.0894781288472775 L298A-K304A 0.0892995649291621 F201A-L367A 0.0886699894519436 A229A-V362A 0.0884175125998441 G292A-P300A 0.0879617430539845 C254A-I301A 0.087867742345773 L234A-A366A 0.0877303963515175 G329A-V360A 0.0876088838918971 G292A-G329A 0.0875853686229959 C209A-I231A 0.0873673999148972 C254A-F308A 0.0873664257305395 C254A-S296A 0.0873314770699901 G198A-G265A 0.0872834716197255 G198A-I266A 0.0871706954242004 S238A-V363A 0.087151671127419 A205A-G230A 0.0869835695494094 Y257A-L298A 0.0862720813141635 Y240A-M293A 0.0862349271782374 T237A-H369A 0.0852691921049198 L323A-Y328A 0.0852395370983574 E321A-G365A 0.0851187959118338 L298A-M324A 0.0849372276650437 S206A-Y335A 0.0846592694716053 L305A-E321A 0.084609821611859 M293A-M324A 0.0842942719062956 I235A-I301A 0.0835418912268415 I263A-G297A 0.0834503405608709 E321A-L327A 0.0833786421079195 V334A-H353A 0.0833378521022197 F239A-E321A 0.082958674528637 I231A-I263A 0.0826822607637516 A236A-I266A 0.0821647173641726 A299A-I306A 0.0820927217631247 S238A-G259A 0.0817936811120947 S238A-T368A 0.0817094565741963 C202A-A236A 0.0816137907160501 A236A-G292A 0.0815355163617588 A236A-H369A 0.0813965575683349 I200A-L234A 0.0812431465694452 L211A-I350A 0.0811367692133715 A233A-G294A 0.0807381668303249 C202A-A366A 0.0803627664400846 L204A-R225A 0.0799910054760646 A232A-G292A 0.0799403375202807 L204A-A229A 0.0798496473925363 V333A-H355A 0.079631441615474 C202A-G365A 0.0795155430881263 A232A-Y328A 0.0795132108500507 I222A-I231A 0.0794706817767799 L289A-G294A 0.0786927634269163 F290A-A366A 0.0782855289137219 A232A-T268A 0.0779802773049871 Y240A-H369A 0.0778659131865758 G197A-S206A 0.077786954869151 T237A-M293A 0.0777234760039165 L326A-A364A 0.0772750234493587 F253A-A299A 0.0772743943019893 Y328A-H359A 0.0772561092119635 G230A-A267A 0.0769877642642403 T237A-I266A 0.0768975839518733 A351A-V360A 0.076874653719635 G294A-T368A 0.0768464253779548 R225A-G230A 0.0767850264123577 C202A-L367A 0.0767697737502431 I200A-V360A 0.0767238735638525 L330A-L361A 0.076570648542611 I222A-L270A 0.0763136939290217 G319A-H369A 0.0761311609604451 L258A-F295A 0.0758685313426479 V333A-Q356A 0.0749774167082409 A332A-Q356A 0.0747248816153832 I235A-L361A 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