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2VUR
(resolution: 2.10 Å)
Select a model
Model 1
ID
Name
Organism
Chains bound to carbohydrates
1
O-GlcNAcase NagJ
Q0TR53
(OGA_CLOP1)
CAZy family:
GH84
CLOSTRIDIUM PERFRINGENS
2 chains bound to carbohydrates
Chain A
:
2 binding sites
Chain B
:
2 binding sites
Chain properties
This chain feature no protein-carbohydrate interface.
Entity 1 (O-GlcNAcase NagJ )
A
B
Carbohydrates
ID
Description
N° of binding sites
Bound to chains
Binding affinity
2
2-deoxy-2-{[(2-hydroxy-1-methylhydrazino)carbonyl]amino}-β-D-glucopyranose
2 (2 molecules)
A, B
ic50=30uM (MOAD),-logKd/Ki=4.52, IC50=30uM (PDBbind-CN) ; ic50=30uM (MOAD)
Binding sites
Select a binding site
(Entity 2 - molecule 1) -- 2VUR_1_YX1_1 -- YX11626:A -- bound to chains A,B -- Cluster not attributed--
(free)
-- 75 atoms and SASA 422 A²
(Entity 2 - molecule 2) -- 2VUR_1_YX1_2 -- YX11626:B -- bound to chains A,B -- Cluster not attributed--
(free)
-- 77 atoms and SASA 416 A²
Related structures
Bound to carbohydrates
6RHE
2YDQ
2J1A
2J7M
2J1E
2CBJ
2YDR
4ZXL
2YDS
2VUR
Without carbohydrates
2CBI
2J62
2JH2
2O4E
2OZN
2V5C
2V5D
2W1N
2WB5
2X0Y
2XPK
5OXD
7KHV