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5JPT
(resolution: 2.94 Å)
Select a model
Model 1
ID
Name
Organism
Chains bound to carbohydrates
1
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
P53131
(PRP43_YEAST)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
2 chains bound to carbohydrates
Chain A
:
1 binding site
Chain B
:
1 binding site
Chain properties
This chain feature no protein-carbohydrate interface.
Entity 1 (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 )
A
B
Carbohydrates
ID
Description
N° of binding sites
Bound to chains
Binding affinity
2
cytidine-5'-diphosphate
2 (2 molecules)
A, B
-logKd/Ki=4.60, Kd>25uM (PDBbind-CN) ;
Binding sites
Select a binding site
(Entity 2 - molecule 1) -- 5JPT_1_CDP_1 -- CDP801:A -- bound to chain A -- Cluster not attributed--
(free)
-- 59 atoms and SASA 431 A²
(Entity 2 - molecule 2) -- 5JPT_1_CDP_2 -- CDP801:B -- bound to chain B -- Cluster not attributed--
(free)
-- 58 atoms and SASA 418 A²
Related structures
Bound to carbohydrates
5I8Q
2XAU
3KX2
5JPT
5Y88