5K9K (resolution: 2.97 Å)

ID Name Organism Chains bound to carbohydrates
1 56.a.09 Heavy chain
Heavy chain subclass: IGHV6
Homo sapiens 2 chains bound to carbohydrates
Chain A:
1 glycosylation head interface
3 glycosylation body interfaces
Chain D [auth H]:
1 glycosylation head interface
5 glycosylation body interfaces
2 56.a.09 Light chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 2 chains bound to carbohydrates
Chain B:
1 glycosylation head interface
2 glycosylation body interfaces
Chain E [auth L]:
1 glycosylation head interface
3 glycosylation body interfaces
3 Hemagglutinin
Q91MA7 (HEMA_I68A4)
Influenza A virus (strain A/Hong Kong/1/1968 H3N2) 2 chains bound to carbohydrates
Chain C [auth I]:
1 binding site
6 glycosylation head interfaces
8 glycosylation body interfaces
6 N-glycosylations
Chain F:
7 glycosylation head interfaces
6 glycosylation body interfaces
7 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 11 (4 molecules) A, B, C, F
[auth A,B,F,I]
5 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (2 molecules) C, F
[auth F,I]
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) C
[auth I]
7 α-D-mannopyranose-(1-4)-α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) C
[auth I]
8 α-D-mannopyranose-(1-4)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) D, E, F
[auth F,H,L]
9 α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) E, F
[auth F,L]
10 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 4 (4 molecules) C, F
[auth F,I]

Binding sites


Related structures